PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G20840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23204 Da PI: 8.7586 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.6 | 4.7e-16 | 64 | 111 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 GVr ++ +g+++AeIrd + k +r++lg+f+++e Aa a+++a+ + +g ONIVA09G20840.1 64 GVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAAMAYDQAAFSVRG 111 ******.**********32..2.24**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MSDRDVDMHI LTALMADMAD SSSSSSSSSS SDDSDMRASA AAAEPEHRRS PAPPPPPRQQ 60 QLIGVRKRPW GKFAAEIRDS TRKGARVWLG TFDSPEAAAM AYDQAAFSVR GASAVLNFPL 120 HRVQESLQAL ALGAAGGSPV LALKRRHSIR KRRKPTKHML LMQQQQQEPT VVELEDLGAD 180 YLEELLRLSE SSSSSSSSSI SNFTTTPNRH CQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 8e-36 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G20840.1 |