PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G17920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 23720.8 Da PI: 10.1033 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 26 | 76 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d +r r +lg+f+taeeAa+ +++a++ l+ge ONIVA09G17920.1 26 RFVGVRQRP-SGRWVAEIKD----SaQRVRLWLGTFDTAEEAARSYDEAARVLRGE 76 589******.7*********....4456*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MAAQESGRMA TATGGVVAAK ARRGRRFVGV RQRPSGRWVA EIKDSAQRVR LWLGTFDTAE 60 EAARSYDEAA RVLRGEHART NFVARGGDAA AAPARARLSR NLRHVMARAA AGGRASAPCA 120 AAGVGAGGEQ FALAAVFRRC MQPAAATQQQ CGAADTTVHV KNAVQPSFVV PRRTEAPPPP 180 TTPMLLAEDV LVDFDDDGLG SAGVETAFMV SSSLIVPSSF VIDDDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 8e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G17920.1 |