PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G17890.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 246aa    MW: 25588.3 Da    PI: 5.116
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G17890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-174597155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr++   grWv+e+r+p ++g  +r +lg++ tae Aa+a++aa+ +l+g
  ONIVA09G17890.1 45 PVYRGVRRRGGAGRWVCEVRVPGKRG--ARLWLGTYVTAEAAARAHDAAMIALRG 97
                     68*******************95544..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDMAGHEVNS SSSSSGAESS SSSSGRQQYK KRPAGRTKFR ETRHPVYRGV RRRGGAGRWV  60
CEVRVPGKRG ARLWLGTYVT AEAAARAHDA AMIALRGGAG GGGAACLNFQ DSAWLLAVPP  120
AAPSDLAGVR RAATEAVAGF LQRNKTTNGA SVAEAIDEAT SGVSKPPPLA NNADSSETPG  180
PSSIDGTADT AAGAALDMFE LDFFGEMDYD TYYASLAEGL LMEPPPAATA LWDNGDEGAD  240
IALWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-19ERF family protein