PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G14780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 623aa MW: 67252 Da PI: 6.0366

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G14780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7.3e-33	423	481	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe ONIVA09G14780.1 423 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHE 481 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MEDWMPPPTP SPRTLMSSFL NEDFVSGSFS NIFSDHESNK PQDQFERSRE LVDLSKEVPS 60 QSARPAFQRD ASLDHSLVSP TQRSNSHGGL AERRAARAGF SVPKIDTSRG GSSTVIRSPV 120 AIPPGLSPTT LLESPVFLYN AMAQPSPTTG TLPFLMASNA KSTIPSATKM DEDCTFGNDT 180 FSFQPHVGSR RPNFSASEKG PNACHQNQSL SNIHQRESSL QSSFTAVKDI TDEKNIKTKT 240 SDSMFGDNHS SDEQDDETNQ NGENSMPPLN HRSGVPLSHT NDPEVNVLEN RGSQTCHNSA 300 SLWDNAKNDC LQDVQSEVIE TRTAACLPVS TNCDTSIMES QDAVDVSSTL SNEEDDRATH 360 GTASIECNGD GDETDSKRRK LDALTAATAA ITTTSNIDMG AAASRGVREP RVVVQTTSEV 420 DILDDGYRWR KYGQKVVKGN PNPRSYYKCT HQGCSVRKHV ERASHDLKSV ITTYEGKHNH 480 EVPAARNSGH GSSGSGNAPS APQSNGSQRR QEQGQASFSQ FGGAAPFSSF VLPPRNQFGP 540 SASNFPFGMV PPGMAIPMPS LGSLAPAKMA GHPSTMQGYQ GLMIPEGEMK TEPMSQLGFP 600 AVNQSSSSFQ QMMNRPPSFG PQM

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MEDWMPPPTP SPRTLMSSFL NEDFVSGSFS NIFSDHESNK PQDQFERSRE LVDLSKEVPS  60
QSARPAFQRD ASLDHSLVSP TQRSNSHGGL AERRAARAGF SVPKIDTSRG GSSTVIRSPV  120
AIPPGLSPTT LLESPVFLYN AMAQPSPTTG TLPFLMASNA KSTIPSATKM DEDCTFGNDT  180
FSFQPHVGSR RPNFSASEKG PNACHQNQSL SNIHQRESSL QSSFTAVKDI TDEKNIKTKT  240
SDSMFGDNHS SDEQDDETNQ NGENSMPPLN HRSGVPLSHT NDPEVNVLEN RGSQTCHNSA  300
SLWDNAKNDC LQDVQSEVIE TRTAACLPVS TNCDTSIMES QDAVDVSSTL SNEEDDRATH  360
GTASIECNGD GDETDSKRRK LDALTAATAA ITTTSNIDMG AAASRGVREP RVVVQTTSEV  420
DILDDGYRWR KYGQKVVKGN PNPRSYYKCT HQGCSVRKHV ERASHDLKSV ITTYEGKHNH  480
EVPAARNSGH GSSGSGNAPS APQSNGSQRR QEQGQASFSQ FGGAAPFSSF VLPPRNQFGP  540
SASNFPFGMV PPGMAIPMPS LGSLAPAKMA GHPSTMQGYQ GLMIPEGEMK TEPMSQLGFP  600
AVNQSSSSFQ QMMNRPPSFG PQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	2e-53	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G14780.1