PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G13640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 205aa MW: 21908.8 Da PI: 8.0628 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.5 | 1.5e-15 | 29 | 78 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rr+h+e+Er+RR+riN +++Lr l+P+a + +++Ka+ L ++v+Y+++L ONIVA09G13640.1 29 RRSHSEAERKRRERINAHLDTLRGLVPSA---SRVRMDKAALLGEVVRYVRKL 78 99***************************...9******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MVAARSGDDA ELGLDVECLA AAPRWTRARR SHSEAERKRR ERINAHLDTL RGLVPSASRV 60 RMDKAALLGE VVRYVRKLRS EAAGSAAVVP GEGDEVVVEE EEVEAARRVK ASVCCADRPG 120 LMSELGDAER SVSARAVRAE IATVGGRTRS VLELDVARTA AAGGGSNGAS QLPALQAALR 180 AVIMSQEELL AVESYKQRRF SADFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 41 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 4e-16 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G13640.1 |