PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G13330.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GeBP

Protein Properties

Length: 437aa MW: 45992.9 Da PI: 8.6682

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G13330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	102.3	4e-32	188	285	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 +++r+ws+ De+v+L+Gli++++k+g+ +++di ++++++++++s+kvs++ql++K+rrLK+K+++ ++ak+gke +f +hd++i++l+k ONIVA09G13330.1 188 RPSRVWSQADELVILRGLITYRTKRGVlpGSTQDIGKLHSYIRGQLSAKVSTTQLSDKVRRLKQKYQMLATRAKTGKE-VFPIPHDHNIYQLAK 280 678**********************888899***********************************999999.9********** PP DUF573 94 kiWgs 98 k+Wg+ ONIVA09G13330.1 281 KVWGT 285 *95 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MAPKRPAEEA DAAAAAAGGS ASEGSDAEAS AEAARGHGSS PSPSKTPPPA NPNPKSAAAP 60 PSAVAAPASA AGSDSGAASD SPRAAGNPSG PRSIEVNSDS EDSALPLASD AYADQAAAAG 120 AGAGADSDDG NTSPLPPPRP SRAEAAAIKP ISSRPMDPPP RRSAGGSEPR AKRPRSAAVA 180 SSAEHSKRPS RVWSQADELV ILRGLITYRT KRGVLPGSTQ DIGKLHSYIR GQLSAKVSTT 240 QLSDKVRRLK QKYQMLATRA KTGKEVFPIP HDHNIYQLAK KVWGTMSTAG EGGGSGYDNA 300 DAGESEEEQY GRESDDDMES GRDNRHRKNQ RSVPVTMANG NGTGIGAVNA IVRGRSEFEK 360 GKDVYPYLWE TVEELSSQHP TGAVFKKAFE LLEGSKAQVM EEKLRKFRLT EMRQQLRRMD 420 LMKDTLSMVL DALEMAD

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MAPKRPAEEA DAAAAAAGGS ASEGSDAEAS AEAARGHGSS PSPSKTPPPA NPNPKSAAAP  60
PSAVAAPASA AGSDSGAASD SPRAAGNPSG PRSIEVNSDS EDSALPLASD AYADQAAAAG  120
AGAGADSDDG NTSPLPPPRP SRAEAAAIKP ISSRPMDPPP RRSAGGSEPR AKRPRSAAVA  180
SSAEHSKRPS RVWSQADELV ILRGLITYRT KRGVLPGSTQ DIGKLHSYIR GQLSAKVSTT  240
QLSDKVRRLK QKYQMLATRA KTGKEVFPIP HDHNIYQLAK KVWGTMSTAG EGGGSGYDNA  300
DAGESEEEQY GRESDDDMES GRDNRHRKNQ RSVPVTMANG NGTGIGAVNA IVRGRSEFEK  360
GKDVYPYLWE TVEELSSQHP TGAVFKKAFE LLEGSKAQVM EEKLRKFRLT EMRQQLRRMD  420
LMKDTLSMVL DALEMAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	9e-15	GeBP family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G13330.1