PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G13010.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 504aa MW: 53530.2 Da PI: 8.5883

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G13010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.4	6.1e-06	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H ONIVA09G13010.1 66 YVCEICNQGFQRDQNLQMHRRRH 88 9*********************9 PP
2	zf-C2H2	11.6	0.00086	145	166	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C C+k + +s++k H++t+ ONIVA09G13010.1 145 ACARCSKAYAVHSDYKAHLKTC 166 6*******************98 PP
3	zf-C2H2	10.7	0.0016	174	192	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ ONIVA09G13010.1 174 DCGRVFSRVESFIEHQDTC 192 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MLGSCAPTTA GPPPDEATTP EPFRSLQIAT ASAGSAKKKR RPAGTPDPDA EVVSLSPRTL 60 LESDRYVCEI CNQGFQRDQN LQMHRRRHKV PWKLLKREAG EAARKRVFVC PEPTCLHHDP 120 SHALGDLVGI KKHFRRKHSG HRQWACARCS KAYAVHSDYK AHLKTCGTRG HSCDCGRVFS 180 RVESFIEHQD TCNASRGQAA AVAEGGNVST AACGGVAVLE QEKQLDLQAP AAASLSRTAS 240 STSPSSDVVA SPVAWPGAGA PSMPSPKAAA FRGRFDMAPS PPPPSYDHYR GGAGAHNLEL 300 QLMPPFNAGG AAAAPGGMGA CFYAAAHQHH PTGVSQCNDA STQLQLSIGR GEVMGAAGTS 360 DEASAAATAK EQAREQLRQA MAEKEAAGEA RAQARRQVEL AEQELATARR MRHQAQVELS 420 RAHALRDHAV RQVNATLLQI TCFSCRHKFR AAAAGAPLPA AMSSDVACSY VSSVVTEGGD 480 ADEPLDVVDA TRRRLQHANS MGIM

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MLGSCAPTTA GPPPDEATTP EPFRSLQIAT ASAGSAKKKR RPAGTPDPDA EVVSLSPRTL  60
LESDRYVCEI CNQGFQRDQN LQMHRRRHKV PWKLLKREAG EAARKRVFVC PEPTCLHHDP  120
SHALGDLVGI KKHFRRKHSG HRQWACARCS KAYAVHSDYK AHLKTCGTRG HSCDCGRVFS  180
RVESFIEHQD TCNASRGQAA AVAEGGNVST AACGGVAVLE QEKQLDLQAP AAASLSRTAS  240
STSPSSDVVA SPVAWPGAGA PSMPSPKAAA FRGRFDMAPS PPPPSYDHYR GGAGAHNLEL  300
QLMPPFNAGG AAAAPGGMGA CFYAAAHQHH PTGVSQCNDA STQLQLSIGR GEVMGAAGTS  360
DEASAAATAK EQAREQLRQA MAEKEAAGEA RAQARRQVEL AEQELATARR MRHQAQVELS  420
RAHALRDHAV RQVNATLLQI TCFSCRHKFR AAAAGAPLPA AMSSDVACSY VSSVVTEGGD  480
ADEPLDVVDA TRRRLQHANS MGIM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	41	KKKRR
2	37	42	KKKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-107	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G13010.1