PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G11170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 398aa    MW: 42767 Da    PI: 4.5973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G11170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19137186255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+G+r+++ +g+W+AeIrdps+     r++lg++ taeeAa+a++a ++k++g
  ONIVA09G11170.1 137 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDAEARKIRG 186
                      69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCGGAIISGF IPPSAAAAAA AAAAAKKQQG RRVTADVLWP GMLRKGKAAA AEEDFEADFR  60
EFERGMSDDE AEGGGGEEEE EEEDDVVVVV PPPAAARFVV RAAAKAAPPT ADGMLTTKLV  120
QHDGPTARSA KRKRKNQYRG IRQRPWGKWA AEIRDPSKGV RVWLGTYNTA EEAARAYDAE  180
ARKIRGKKAK VNFPDEPAVA QKLSLKQNAA KQEKLAPPLK TCGDDAFFQL NSSDNDLFAM  240
LAKVPAKPAE PVDLMPPVKP LASTETFEMN MLSDTSSNSF GSSDFGWEDD TLTPDYTSVF  300
VPNAAMPAYG EPAYLTGGAP KRMRNNYGIA VPQGNGMPNL AQNMPAVDPE MKYLPLPYVE  360
SSSDESMDNL LQNDATQDGA SNEGIWSLDE LLMAAGAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.12e-27ERF family protein