PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G10950.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 407aa MW: 43759.2 Da PI: 7.7997

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G10950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.5	1.3e-12	102	144	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T++Ed l+ + G++ W+tIa+ ++ gRt++++k++w++ ONIVA09G10950.1 102 GGFTEDEDRLICSLYIAIGSR-WATIAAQLP-GRTDNDIKNYWNS 144 569****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGRAPCCDKA TVKKGPWAPE EDAALKAYVD AHGTGGNWIA LPHKIGTCRA RRRRLEMTVL 60 MSIWLIAHRP ELVVVVYAGL NRCGKSCRLR WLNYLRPNIR HGGFTEDEDR LICSLYIAIG 120 SRWATIAAQL PGRTDNDIKN YWNSKLKRRL LGGGRRPRGA PPRLVLTGPG PAVTAAATSR 180 NAMAASAIER MQLSVRLRRL EAAAPPPPQP FAFYGSNNLA APPWQQPISP AASGSSEMPR 240 RLHHHHPSGA AATSSYSGLI SSWPSSRSHI IHDAWLDASS TPPLSTTSMG DAATTTTTAG 300 GESSSSTPTV STATTPFIGG SIDMDDEIDM LLQQIRCFDE NGDDDADQRL IVGDEAAAGA 360 ENYLRALIDE AAANGGDVGV GSWSSCSTPG VDSVFHEYAQ LDYGQYN

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGRAPCCDKA TVKKGPWAPE EDAALKAYVD AHGTGGNWIA LPHKIGTCRA RRRRLEMTVL  60
MSIWLIAHRP ELVVVVYAGL NRCGKSCRLR WLNYLRPNIR HGGFTEDEDR LICSLYIAIG  120
SRWATIAAQL PGRTDNDIKN YWNSKLKRRL LGGGRRPRGA PPRLVLTGPG PAVTAAATSR  180
NAMAASAIER MQLSVRLRRL EAAAPPPPQP FAFYGSNNLA APPWQQPISP AASGSSEMPR  240
RLHHHHPSGA AATSSYSGLI SSWPSSRSHI IHDAWLDASS TPPLSTTSMG DAATTTTTAG  300
GESSSSTPTV STATTPFIGG SIDMDDEIDM LLQQIRCFDE NGDDDADQRL IVGDEAAAGA  360
ENYLRALIDE AAANGGDVGV GSWSSCSTPG VDSVFHEYAQ LDYGQYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-63	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G10950.1