PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G10050.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 383aa MW: 40554.7 Da PI: 7.2707

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G10050.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.9	1e-28	208	267	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkk++r+aed ++++ tYegeHnh ONIVA09G10050.1 208 VKDGYQWRKYGQKVTRDNPYPRAYFRCAFApSCPVKKKLQRCAEDRSMLVATYEGEHNHA 267 58*************************99**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEENAKISFV GLIYMWITII LAQSSRFGPP PVRRRATYGA TISNVPYCCH AVLPPAHRAA 60 SLAAAMDDDG DGSSSPTDDS AAAGLLPLFS RSPAEDLEEK LRRAMEENAR LTRALDAILA 120 GHHAHQRALL APSLSPPPPS ATARAPSVST SCAAREDAAP AVAAAAASTA CPSRQQPPTA 180 EPRPKVRTVR VRADAADATD ANSMAETVKD GYQWRKYGQK VTRDNPYPRA YFRCAFAPSC 240 PVKKKLQRCA EDRSMLVATY EGEHNHALST QTTEFVASGC TTSQHAGGSS SSPLPCSISI 300 NSSGRTITLD LTNQAGSGSI ASCGVEAAAV SGELVTVLSP ELRRHLVEEV VQVLKNDAEF 360 VEAVTNAVAA RVVDQIPHIP VHL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEENAKISFV GLIYMWITII LAQSSRFGPP PVRRRATYGA TISNVPYCCH AVLPPAHRAA  60
SLAAAMDDDG DGSSSPTDDS AAAGLLPLFS RSPAEDLEEK LRRAMEENAR LTRALDAILA  120
GHHAHQRALL APSLSPPPPS ATARAPSVST SCAAREDAAP AVAAAAASTA CPSRQQPPTA  180
EPRPKVRTVR VRADAADATD ANSMAETVKD GYQWRKYGQK VTRDNPYPRA YFRCAFAPSC  240
PVKKKLQRCA EDRSMLVATY EGEHNHALST QTTEFVASGC TTSQHAGGSS SSPLPCSISI  300
NSSGRTITLD LTNQAGSGSI ASCGVEAAAV SGELVTVLSP ELRRHLVEEV VQVLKNDAEF  360
VEAVTNAVAA RVVDQIPHIP VHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31800.2	1e-36	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G10050.1