PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G06980.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 291aa    MW: 30752.2 Da    PI: 6.671
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G06980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.5e-21110159255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  ONIVA09G06980.1 110 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 159
                      59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAAAIDLSGE ELMRALEPFI RDASGSPPVC SQFSPTSPFS FPHAFAYGGG LAQQPELSPA  60
QMHYIQARLH LQRQAAQAGP LGPRAQPMKA SSSSASAAGA AATPPRPQKL YRGVRQRHWG  120
KWVAEIRLPR NRTRLWLGTF DTAEEAALAY DQAAYRLRGD AARLNFPDNA ASRGPLHASV  180
DAKLQTLCQN IAAAKNAKKS SVSASAAATS SAPTSNCSSP SSDDASSCLE SADSSPSLSP  240
SSAATTAETP ATVPEMQQLD FSEAPWDEAA AFALTKYPSY EIDWDSLLAA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-34ERF family protein