PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA09G04210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26505.2 Da PI: 4.6809 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 4e-20 | 98 | 147 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +grW++eIrdp+ + +r++lg+f+ta eAa+a++a +++++g+ ONIVA09G04210.1 98 YRGVRQRP-WGRWASEIRDPV----KgARVWLGTFDTAAEAARAYDAEARRIHGH 147 9*******.**********75....44**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
MCGGALIPND YGDKPPPPPS ESSEWDATTK MKKKKKRGGG GDDDWEAAFR EFIAGDVDDD 60 DDGVSMFPSG AGTMETTTEV AVVERPRRRR RVRRSYPYRG VRQRPWGRWA SEIRDPVKGA 120 RVWLGTFDTA AEAARAYDAE ARRIHGHKAR TNFPPDEPPR PAPSQAPFCF LLDDDDDGVA 180 RGNSPASSSA PDSTSACTTS STVASGERGD ELILLECCSD DVMDSLLAGF DVSSESRSIL 240 GMVN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 85 | 93 | RPRRRRRVR |
2 | 87 | 94 | RRRRRVRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33710.1 | 2e-15 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA09G04210.1 |