PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G04150.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 614aa MW: 65868 Da PI: 5.9485

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G04150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.7	9.7e-28	525	577	2	54
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 d g++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+ +d+++v++tY g ONIVA09G04150.2 525 DAGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERALHDTRAVITTYAG 577 569************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MALELSLVSA SPPGGLAASP PPPAAIPGKE QQVAGVGILL QISMLVLSFV LGHVLRRHRF 60 YYLPEASASL LIGLVVGGLA NISNTETNTR TQSGFSLSPK PFFANFGAIV TFAILGTFVA 120 SVVTGVLVYL GGLTFLMYKL PFVECLMFGA LISATDPVTV LSIFQELGTD VNLYALVFGE 180 SVLNDAMAIS LYRTMSLVRS QAAAGENFFM MVFQFLETFV GSLSSEGLGL SGIVSILFTG 240 MVMKHYTFSN LSNNSQRFVS AFFHLLSSLA ETFVAVNVFS CAYLVNMSRP EHRRIPLKHQ 300 KALWFSGLRG AMAFALALQS ANELPGGHGK TIFTTTTAIV VLTVLLIGGS TGTMLEALDV 360 IGDENRSIEN YDDNNGYIPP TYEEGSSSGG GLRMKLKEFH KSTTSFTALD RNYLTPFFTS 420 QTDEDDDVFV LRNTSSGCAA AAACADQYSA ATPDNSSVTF GDDEADNESH SSEGYEPEAK 480 CWKEDADNEG SSGGMGGGAG GKPVRKPRLV VHTLSDIDIN IDILDAGFRW RKYGQKVVKG 540 NPNPRSYYKC TTVGCPVRKH VERALHDTRA VITTYAGAVV QRDPAVGSAN GAGAAFQRTK 600 DKPRDDLFVE SLLC

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MALELSLVSA SPPGGLAASP PPPAAIPGKE QQVAGVGILL QISMLVLSFV LGHVLRRHRF  60
YYLPEASASL LIGLVVGGLA NISNTETNTR TQSGFSLSPK PFFANFGAIV TFAILGTFVA  120
SVVTGVLVYL GGLTFLMYKL PFVECLMFGA LISATDPVTV LSIFQELGTD VNLYALVFGE  180
SVLNDAMAIS LYRTMSLVRS QAAAGENFFM MVFQFLETFV GSLSSEGLGL SGIVSILFTG  240
MVMKHYTFSN LSNNSQRFVS AFFHLLSSLA ETFVAVNVFS CAYLVNMSRP EHRRIPLKHQ  300
KALWFSGLRG AMAFALALQS ANELPGGHGK TIFTTTTAIV VLTVLLIGGS TGTMLEALDV  360
IGDENRSIEN YDDNNGYIPP TYEEGSSSGG GLRMKLKEFH KSTTSFTALD RNYLTPFFTS  420
QTDEDDDVFV LRNTSSGCAA AAACADQYSA ATPDNSSVTF GDDEADNESH SSEGYEPEAK  480
CWKEDADNEG SSGGMGGGAG GKPVRKPRLV VHTLSDIDIN IDILDAGFRW RKYGQKVVKG  540
NPNPRSYYKC TTVGCPVRKH VERALHDTRA VITTYAGAVV QRDPAVGSAN GAGAAFQRTK  600
DKPRDDLFVE SLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-35	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G04150.2