PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G03360.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 292aa MW: 33325.4 Da PI: 6.3659

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G03360.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	55.2	1.4e-17	125	189	3	58
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST......TEEEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp......kvveitYegeHnh 58 Dgy+WrKYGqK++ +++++rsYYrCt + gC+++k v++ ++ + k+ ++ Y +H++ ONIVA09G03360.1 125 DGYEWRKYGQKSISKTKHSRSYYRCTNQkgqGCMATKTVQQIENGNssnsvvKLYNVDYFCKHTC 189 9************************99999****998775431111112334556666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MSANIESFCC IDHRMIIQEM KREHGLLIDL KNHIIPILRF NNVQADHIVH AFDDILCCSN 60 GIISKIQAEV CDGGNSDPGI DKGNGRNNAL DNMKVFIEDG TVTKKKRRKN AQHTGSVVTA 120 TPDYDGYEWR KYGQKSISKT KHSRSYYRCT NQKGQGCMAT KTVQQIENGN SSNSVVKLYN 180 VDYFCKHTCK VSNEMVCPDI VETDSPKYSS INDKYASTRL TNHSDDHQPN NEMKPENFFA 240 VPDMSLFSEN MWDIMFEDVT MNSTFSLEQE AKDSWIKHQQ DSTIHLWADE LC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	108	KKKRR
2	104	109	KKKRRK
3	105	109	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22570.1	1e-15	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G03360.1