PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G02600.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 411aa MW: 44158.7 Da PI: 9.0583

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G02600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.1	3.4e-12	34	58	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LH+rFv+av+qLGG++ ONIVA09G02600.1 34 KPRLRWTADLHDRFVDAVAQLGGPD 58 79*********************98 PP
2	Myb_DNA-binding	27.3	8.1e-09	36	57	1	22
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r+rWT+++++++vdav+qlGg+ ONIVA09G02600.1 36 RLRWTADLHDRFVDAVAQLGGP 57 89******************98 PP
3	Myb_DNA-binding	33	1.4e-10	197	252	8	48
HHHHHHHHHHHTTTT..............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGgg..............tWktIartmg.kgRtlkqcksrwqkyl 48 Ed+ll ++++ + t+ktI+rtmg kg+tl ++ks++qky+ ONIVA09G02600.1 197 EDDLLSAVHQRSQQPmvraaaehahmleaTPKTIMRTMGvKGLTLFHLKSHLQKYR 252 666666666666666888888888889999*************************7 PP
4	G2-like	48.7	1.6e-15	224	253	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPkti+++m+vkgLtl h+kSHLQkYRl ONIVA09G02600.1 224 EATPKTIMRTMGVKGLTLFHLKSHLQKYRL 253 7****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDTE 60 GSGGSGWRDG GRGGFKYGAC GGGESGICGG AQGRLPPAAA AAASRKDQSF STTSATAMPS 120 GSAATGPARR EGGEHARPWM GERVVFAGKV ERRAAASAGW RFTIVGTRKY AFPRDLTRTS 180 SLEEPRDMLQ LLVRDGEDDL LSAVHQRSQQ PMVRAAAEHA HMLEATPKTI MRTMGVKGLT 240 LFHLKSHLQK YRLGKQSGKE MAEQSKDASY ILGAQSGTNL SPTVPTPDLK ESQELKEALR 300 AQMEVQRKLH EQVEVQRHVQ IRMEAYQNYI DTLLEKACNI VSEQLNGFSI SDHDLTSAGV 360 MLSSSDTLSP SIFHQLSVSS ISLHSPGGKS SPFAADADLF FQKAPEKRKS Y

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDTE  60
GSGGSGWRDG GRGGFKYGAC GGGESGICGG AQGRLPPAAA AAASRKDQSF STTSATAMPS  120
GSAATGPARR EGGEHARPWM GERVVFAGKV ERRAAASAGW RFTIVGTRKY AFPRDLTRTS  180
SLEEPRDMLQ LLVRDGEDDL LSAVHQRSQQ PMVRAAAEHA HMLEATPKTI MRTMGVKGLT  240
LFHLKSHLQK YRLGKQSGKE MAEQSKDASY ILGAQSGTNL SPTVPTPDLK ESQELKEALR  300
AQMEVQRKLH EQVEVQRHVQ IRMEAYQNYI DTLLEKACNI VSEQLNGFSI SDHDLTSAGV  360
MLSSSDTLSP SIFHQLSVSS ISLHSPGGKS SPFAADADLF FQKAPEKRKS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	8e-42	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G02600.1