PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G01720.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family CO-like
Protein Properties Length: 335aa    MW: 36052 Da    PI: 5.2724
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G01720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box25.72.4e-081356441
         zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41
                     ++C+ + + +  ++C  ++  lC++C    H +       H++vp
  ONIVA09G01720.1 13 QRCDSCRSAPCAFYCLADSAALCATCDADVH-SvnplarrHRRVP 56
                     79*****************************.4478888899887 PP
2CCT69.11.2e-23268311144
              CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                      Rea++ RY+eKrktR+FeK+irY+sRKa+Ae+RpR+KGrF+k++
  ONIVA09G01720.1 268 REARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRS 311
                      9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MLKLEPEFPG LPQRCDSCRS APCAFYCLAD SAALCATCDA DVHSVNPLAR RHRRVPMGVV  60
AAPGAGGAFV VRPAGGVNSS WPIREGRRCD YDDDDADAAG EEDEEATSWL LFDPLKDSSD  120
QGLPPFGDAL VADFLNLGGG AGEKEDASSG KDCSSSHGKS SEGSHEFAVP GEPVPERQGF  180
GAVSMDITDY DASNFRRGYS FGASLGHSVS MSSLENMSTV PDCGVPDITT SYLRSSKSTI  240
DLFTAAAGSP VAAHSIMSPP QFMGAIDREA RVHRYREKRK TRRFEKTIRY ASRKAYAETR  300
PRIKGRFAKR SDTDLEVDQY FSTTADSSCG VVPTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15850.11e-17CO-like family protein