PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G01370.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 416aa    MW: 44795.6 Da    PI: 9.4865
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G01370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55.1e-05309331123
                      EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                      y+C +Cg++Fs+   L  H+++H
  ONIVA09G01370.1 309 YECRKCGTMFSSGQALGGHMKSH 331
                      99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MASSRISSSE SERPVGSYRF HIPRQPPRIQ AEGGKRHMII GDRRHGGTAL WRRGSMLPPS  60
LPRWGVEDGH GHVDGSSRQH PSELGSSFAL SVPIGGWIWR LAAAQAHGEV IDGGRCEDEA  120
GDHMQPPPAS SASMAMLSEE RISASGIVVR ERQLHGYGER PFLPCLATMA AKGTAREIST  180
KKIAKKDHGE VGDLTMAVLM PSWTSTGNHS SRNPTRCLEQ LPEPSKRAHS EAYGNMQLAT  240
GDLIVGLHKQ ATITVPPPNI SEIGGHLTAH KNNEMTVGKG VQHTIDVSVA KEATRSLVSS  300
ARQSRRGPYE CRKCGTMFSS GQALGGHMKS HNSDERWGDK RVPSAFVGSL LSLITPIDVS  360
NVSVPSSRNP HTSSIPNKEE GRVLVMGAAP LNGVPKGSFR LFGENIAEAP KEEPME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.15e-08C2H2 family protein