PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GeBP | ||||||||
Protein Properties | Length: 489aa MW: 54407.5 Da PI: 10.3299 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 30.8 | 8.2e-10 | 82 | 169 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 fqr ws +De+++L ++ ++++gk +++ ++++++ k + + l +K+r + ++ ++ k+ +++hd+ ++ls+ + ONIVA09G00040.1 82 FQRTWSPNDEVLILEAMAAHRQEHGKV--PTAAELFPVLNGRLDRKrLTYKKLADKLRTFMRRHGRDAKN------GPPTQAHDRRLYDLSRNV 167 9************************65..56789999999999865278899********9999998888......556899************ PP DUF573 96 Wg 97 W ONIVA09G00040.1 168 WV 169 *6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 489 aa Download sequence |
MAPTLPVVPA HGEDKKKKKK KKKKPSQEEE ALPLPLPLPP PDRKRKKASE PVNSPERAKK 60 KKKTATPHEP PSAKQQKRPL PFQRTWSPND EVLILEAMAA HRQEHGKVPT AAELFPVLNG 120 RLDRKRLTYK KLADKLRTFM RRHGRDAKNG PPTQAHDRRL YDLSRNVWVS QTQPPNLSAN 180 ANSNIAGGQP NQHDAMPTAG KAFVKMRDSY PNLTQALLLL VGTDLEKSLT AIDETKAQAL 240 DLKVSNLKKE LSEAVMESAT IQSTESSKIP CFPSTKLQPE FGAEIEKNFQ LEHLDEMKGA 300 QSQQMVDSKQ QQDKSSAKGI ICESSESGLR SIVADNNILC NTLQKEMVIQ QKLSCGKTKE 360 VTSKHRHPQK GELRRVTMHG QKEDTNNEGG KEVLLLSTTR PHIPVAKATL QTSSGSKFVG 420 GMPLGSEWYQ VFVNDVLKPE APLLRPPGMK MAEALKSIIA WPCAQVTDKA DFMSETKLYR 480 FAHYKGCGS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 25 | DKKKKKKKKKKP |
2 | 15 | 21 | KKKKKKK |
3 | 15 | 23 | KKKKKKKKK |
4 | 15 | 24 | KKKKKKKKKK |
5 | 16 | 22 | KKKKKKK |
6 | 16 | 24 | KKKKKKKKK |
7 | 16 | 46 | KKKKKKKKKPSQEEEALPLPLPLPPPDRKRK |
8 | 17 | 23 | KKKKKKK |
9 | 17 | 47 | KKKKKKKKKPSQEEEALPLPLPLPPPDRKRK |
10 | 18 | 24 | KKKKKKK |
11 | 18 | 48 | KKKKKKKKKPSQEEEALPLPLPLPPPDRKRK |
12 | 18 | 63 | KKKKKKKPSQEEEALPLPLPLPPPDRKRKKASEPVNSPERAKKKKK |
13 | 19 | 49 | KKKKKKKKKPSQEEEALPLPLPLPPPDRKRK |
14 | 19 | 64 | KKKKKKKPSQEEEALPLPLPLPPPDRKRKKASEPVNSPERAKKKKK |
15 | 19 | 47 | KKKKKKPSQEEEALPLPLPLPPPDRKRKK |
16 | 20 | 50 | KKKKKKKKKPSQEEEALPLPLPLPPPDRKRK |
17 | 20 | 65 | KKKKKKKPSQEEEALPLPLPLPPPDRKRKKASEPVNSPERAKKKKK |
18 | 20 | 48 | KKKKKKPSQEEEALPLPLPLPPPDRKRKK |
19 | 21 | 66 | KKKKKKKPSQEEEALPLPLPLPPPDRKRKKASEPVNSPERAKKKKK |
20 | 21 | 49 | KKKKKKPSQEEEALPLPLPLPPPDRKRKK |
21 | 43 | 47 | RKRKK |
22 | 43 | 63 | RKRKKASEPVNSPERAKKKKK |
23 | 44 | 72 | KKKKKKPSQEEEALPLPLPLPPPDRKRKK |
24 | 44 | 64 | RKRKKASEPVNSPERAKKKKK |
25 | 45 | 65 | RKRKKASEPVNSPERAKKKKK |
26 | 56 | 62 | ERAKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 5e-11 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G00040.1 |