PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G27000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 300aa MW: 32658.3 Da PI: 7.5 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.7 | 1.5e-30 | 153 | 211 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+++Hnh+ ONIVA08G27000.1 153 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRADPTMLVVTYTSDHNHP 211 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MCDSLFWQSS ADQGDLSDVV RASLQLQTAP RHQAASPPYV HLLGGGGGGG GEDQLAAVSQ 60 HAEQQQQSMV DASAACDLLH ALLPPPPVVQ VQQQGASRTR TTIEEDTTGD GEELFAGAHY 120 VVPPIKRRKS QTKKVVCIPA GASGGGGGEV VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS 180 SKGCSARKQV ERSRADPTML VVTYTSDHNH PWPTHRNALA GSTRPSSSNS SNIRLQDSTP 240 VHHQSQTGHD RLTTTHLKQE DVIISPSLLQ PDHHQLCTII DTKHHLLFHQ DYPHSFGFFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 1e-54 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G27000.1 |