PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G27000.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 300aa    MW: 32658.3 Da    PI: 7.5
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G27000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.5e-30153211259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+++Hnh+
  ONIVA08G27000.1 153 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRADPTMLVVTYTSDHNHP 211
                      699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MCDSLFWQSS ADQGDLSDVV RASLQLQTAP RHQAASPPYV HLLGGGGGGG GEDQLAAVSQ  60
HAEQQQQSMV DASAACDLLH ALLPPPPVVQ VQQQGASRTR TTIEEDTTGD GEELFAGAHY  120
VVPPIKRRKS QTKKVVCIPA GASGGGGGEV VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS  180
SKGCSARKQV ERSRADPTML VVTYTSDHNH PWPTHRNALA GSTRPSSSNS SNIRLQDSTP  240
VHHQSQTGHD RLTTTHLKQE DVIISPSLLQ PDHHQLCTII DTKHHLLFHQ DYPHSFGFFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-54WRKY family protein