PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G21410.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 656aa MW: 71360.3 Da PI: 7.3865

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G21410.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.2e-30	265	320	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+se+prsYY+Ct+++C vkk ve+s+ d++++ei+Y+g+Hnh+ ONIVA08G21410.3 265 EDGYNWRKYGQKQVKNSEHPRSYYKCTFTNCAVKK-VECSQ-DGQITEIVYKGSHNHP 320 8*****************************998.9.*************7 PP
2	WRKY	105.5	2.8e-33	475	533	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+vers++d k v++tYeg+Hnhe ONIVA08G21410.3 475 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERSSHDLKSVITTYEGKHNHE 533 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MDDWMLPSPS PRTLMSSFLN EEFSFGPFSD IFCDNGSNKH QDGLGKSKAF IDSSREETAQ 60 LAKKFESNLF GANQKSSSNG CLSERMAART GFGVLKIDTS RVGYSTPIRS PIPPGVSPRE 120 LLESPVFLPN AIAQPSPTTG KLPFLMHSNV KPSIPKKTED ETRHDRVFFF QPILGSKPPT 180 CPVAEKGFSV NHQNQPSVTD NHQELSLQSS STAAKDFTSA TIVKPKTSDS MLDNDDHPSP 240 ANDQEENATN KNEEYSSDLI ITPAEDGYNW RKYGQKQVKN SEHPRSYYKC TFTNCAVKKV 300 ECSQDGQITE IVYKGSHNHP LPPSNRRPNV PFSHFNDLRD DHSEKFGSKS GQATATSWEN 360 AANGHLQDVG SEVLTKLSAS LTTTEHAEKS VMDKQEAVDI SSTLSNEEDD RVTHRAPLSL 420 GFDANDDDVE HKRRKMDVYA ATSTSTNAID IGAVASRAIR EPRVVVQTTS EVDILDDGYR 480 WRKYGQKVVK GNPNPRSYYK CTHPGCSVRK HVERSSHDLK SVITTYEGKH NHEVPAASSG 540 SAAAPQATNG LLHRRPEPAQ GGGGGSLAQF GYGSAGHRPA EQFGAAAAGF SFGMLPRSIA 600 TPAPSPAIAV PAMQGYPGLV LPRGEMKVNL LPQSGNAGAA ASQQLMGRLP KQHPQM

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MDDWMLPSPS PRTLMSSFLN EEFSFGPFSD IFCDNGSNKH QDGLGKSKAF IDSSREETAQ  60
LAKKFESNLF GANQKSSSNG CLSERMAART GFGVLKIDTS RVGYSTPIRS PIPPGVSPRE  120
LLESPVFLPN AIAQPSPTTG KLPFLMHSNV KPSIPKKTED ETRHDRVFFF QPILGSKPPT  180
CPVAEKGFSV NHQNQPSVTD NHQELSLQSS STAAKDFTSA TIVKPKTSDS MLDNDDHPSP  240
ANDQEENATN KNEEYSSDLI ITPAEDGYNW RKYGQKQVKN SEHPRSYYKC TFTNCAVKKV  300
ECSQDGQITE IVYKGSHNHP LPPSNRRPNV PFSHFNDLRD DHSEKFGSKS GQATATSWEN  360
AANGHLQDVG SEVLTKLSAS LTTTEHAEKS VMDKQEAVDI SSTLSNEEDD RVTHRAPLSL  420
GFDANDDDVE HKRRKMDVYA ATSTSTNAID IGAVASRAIR EPRVVVQTTS EVDILDDGYR  480
WRKYGQKVVK GNPNPRSYYK CTHPGCSVRK HVERSSHDLK SVITTYEGKH NHEVPAASSG  540
SAAAPQATNG LLHRRPEPAQ GGGGGSLAQF GYGSAGHRPA EQFGAAAAGF SFGMLPRSIA  600
TPAPSPAIAV PAMQGYPGLV LPRGEMKVNL LPQSGNAGAA ASQQLMGRLP KQHPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-110	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G21410.3