PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G20630.6

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 561aa MW: 61145.6 Da PI: 7.7234

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G20630.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	123	145	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+F +s + Hi +H ONIVA08G20630.6 123 FECPVCNKTFEEQSRYFGHIGSH 145 89*****************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MSLLGYPEFK TDNIEYGSTQ QHGLCADDGV NVLGVQHQIG TSMDSQSNLP VASATFYSHS 60 RDQDETVADD INSYECQQCN LTFHGQSAYA HHLITFHKVS SKRRKSNKVS KFGEPVIGKD 120 GKFECPVCNK TFEEQSRYFG HIGSHAKYQG LTPEAFLQTF SGKVGLSSSL QVLVGSPQLN 180 EKTTACEARS QHHDCSTKHG GNSTRGIDLF NSNHPANFNG HNQSWCRSDE IPPTTEAQST 240 WTYRNNEMNC ADRTVPRTVP QPNDHEDCRV SGFAEATNFN DQAGRHQGFR PFSFGTTNHC 300 QGQIIDHAVA ASKHAEVNNS MKSRDVNLNS RLNTISFPIA TANNETSTAL NDVNRSCITG 360 KGFSGSFSNN DGAASIVLPS SGLNNKISSS LGVADRSSIA ARSFNAGYVY ENGASEANNI 420 GNKNNTMVYQ TSLAMRPLSP EIAAGPAHVE ALFCLCRRGV VSGQETPLVR HSGSGGLAPS 480 GRPPANKAAA LLREGQPLWC PSGMEAKFHW ISLQDSCTLN VIQSKQSHVA KNAQPKQRWD 540 PHLASHFFIP TRAHLLQFEK Q

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MSLLGYPEFK TDNIEYGSTQ QHGLCADDGV NVLGVQHQIG TSMDSQSNLP VASATFYSHS  60
RDQDETVADD INSYECQQCN LTFHGQSAYA HHLITFHKVS SKRRKSNKVS KFGEPVIGKD  120
GKFECPVCNK TFEEQSRYFG HIGSHAKYQG LTPEAFLQTF SGKVGLSSSL QVLVGSPQLN  180
EKTTACEARS QHHDCSTKHG GNSTRGIDLF NSNHPANFNG HNQSWCRSDE IPPTTEAQST  240
WTYRNNEMNC ADRTVPRTVP QPNDHEDCRV SGFAEATNFN DQAGRHQGFR PFSFGTTNHC  300
QGQIIDHAVA ASKHAEVNNS MKSRDVNLNS RLNTISFPIA TANNETSTAL NDVNRSCITG  360
KGFSGSFSNN DGAASIVLPS SGLNNKISSS LGVADRSSIA ARSFNAGYVY ENGASEANNI  420
GNKNNTMVYQ TSLAMRPLSP EIAAGPAHVE ALFCLCRRGV VSGQETPLVR HSGSGGLAPS  480
GRPPANKAAA LLREGQPLWC PSGMEAKFHW ISLQDSCTLN VIQSKQSHVA KNAQPKQRWD  540
PHLASHFFIP TRAHLLQFEK Q

Link Out ? help Back to Top
Ensembl	ONIVA08G20630.6