PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G20630.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 1044aa MW: 111291 Da PI: 8.0723

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G20630.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00078	562	584	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+F +s + H +H ONIVA08G20630.2 562 FECPVCNKTFEEQSRYFGHVGSH 584 89************999987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1044 aa Download sequence
MPSSSPAGGA LALPLPSSVA EGALGLGRER GGGGSSCFVR ETRFVVPTAV VDEASMEPFV 60 CSGDAHMVLP APVVELTKYS QPNLIMNPRS SEPEASNKET TTIHKVCCRS PPPFILSPTP 120 MPLPPAIPSS PSLPAATMFQ NKELTPTQLR RRHLIPPASD TVASHRSSDR RSGGRLAGEE 180 AAWGGRRRRG GGGGAMETEV FPVVDLRVLS QSDLDALAAA SAHAVAPGGS CPDADQLPPL 240 KIDRAVFNES AGSRKQTFSR VRFGAAAAVA ASPSSPSPSA AAKLPRGNDK EDSFIAYHLR 300 RLFAPDDPSS PQTQTLALPA PPSPDPDQLT TNSKGVSVDL VSLSRLADPY DAELGKRTAG 360 MTTEEELMGF ISSLAGQWVS QRMRRKLVDA SFFGDHLPSG WRLQLGIKRK DRKAWVNCFS 420 YVSPKGQSFA TCQEVSAYLM SLLGYPEFKT DNIEYGSTQQ HGLCADDGVN VLGVQHQIGT 480 GMDSQSILPV ASITFSSHSR DQDETDADDI NSYECQQCNL TFHGQSAYAH HLITFHKMGS 540 KRRKINKVGK FGEPVIGKDG KFECPVCNKT FEEQSRYFGH VGSHAKYHGL TPEAFLQTLS 600 GKVGLSCSLQ DLVGSPQLNE KTTASEARSQ HHNCSTKHGG NSTRDAPSTW TYRNNVTNCA 660 DRTVPRTAPQ PNDHMDCRVS GFAEATNFND QAGRHQGFRP SSFGTTNHCQ GQIIDHAVAA 720 SKHAEVNNSM KSRDVNLNSR LNTISFPIAT ANNETSTALN DVNRSCITGK GFSGSFSNND 780 GAASIVLPSS GLNNKIPSSL GVADRSSIAA RSFNAGYVNE NGASEANNIG NKNNTMVYQT 840 SLAMRPVSPC DLQLGFSGQK QQILPGYGEL RPAASGSPQL GGMAANSSIP TRPSQPQFGS 900 MARTDALPTG PSQPGSLARP NFVPTGFSQF ASRPPTSVPP ADSSQFAGGM ARQNIPTTSE 960 PTLVLGYTPQ MVNGPPAQLG WDLSLSRMVS EGMLPVLCIW CNSQFHHFGP IDAQQSGSFG 1020 FICPACKEKM SGNPNAPNNA VRVY

Sequence ? help Back to Top

Protein Sequence Length: 1044 aa Download sequence

MPSSSPAGGA LALPLPSSVA EGALGLGRER GGGGSSCFVR ETRFVVPTAV VDEASMEPFV  60
CSGDAHMVLP APVVELTKYS QPNLIMNPRS SEPEASNKET TTIHKVCCRS PPPFILSPTP  120
MPLPPAIPSS PSLPAATMFQ NKELTPTQLR RRHLIPPASD TVASHRSSDR RSGGRLAGEE  180
AAWGGRRRRG GGGGAMETEV FPVVDLRVLS QSDLDALAAA SAHAVAPGGS CPDADQLPPL  240
KIDRAVFNES AGSRKQTFSR VRFGAAAAVA ASPSSPSPSA AAKLPRGNDK EDSFIAYHLR  300
RLFAPDDPSS PQTQTLALPA PPSPDPDQLT TNSKGVSVDL VSLSRLADPY DAELGKRTAG  360
MTTEEELMGF ISSLAGQWVS QRMRRKLVDA SFFGDHLPSG WRLQLGIKRK DRKAWVNCFS  420
YVSPKGQSFA TCQEVSAYLM SLLGYPEFKT DNIEYGSTQQ HGLCADDGVN VLGVQHQIGT  480
GMDSQSILPV ASITFSSHSR DQDETDADDI NSYECQQCNL TFHGQSAYAH HLITFHKMGS  540
KRRKINKVGK FGEPVIGKDG KFECPVCNKT FEEQSRYFGH VGSHAKYHGL TPEAFLQTLS  600
GKVGLSCSLQ DLVGSPQLNE KTTASEARSQ HHNCSTKHGG NSTRDAPSTW TYRNNVTNCA  660
DRTVPRTAPQ PNDHMDCRVS GFAEATNFND QAGRHQGFRP SSFGTTNHCQ GQIIDHAVAA  720
SKHAEVNNSM KSRDVNLNSR LNTISFPIAT ANNETSTALN DVNRSCITGK GFSGSFSNND  780
GAASIVLPSS GLNNKIPSSL GVADRSSIAA RSFNAGYVNE NGASEANNIG NKNNTMVYQT  840
SLAMRPVSPC DLQLGFSGQK QQILPGYGEL RPAASGSPQL GGMAANSSIP TRPSQPQFGS  900
MARTDALPTG PSQPGSLARP NFVPTGFSQF ASRPPTSVPP ADSSQFAGGM ARQNIPTTSE  960
PTLVLGYTPQ MVNGPPAQLG WDLSLSRMVS EGMLPVLCIW CNSQFHHFGP IDAQQSGSFG  1020
FICPACKEKM SGNPNAPNNA VRVY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	192	GGRRRRGGG

Link Out ? help Back to Top
Ensembl	ONIVA08G20630.2