PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G19780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 381aa MW: 41474.9 Da PI: 9.9975

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G19780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.5	5.2e-34	27	124	2	103
HHHHHHHHHCTGGGTTTSEES.SSS....SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.eng....nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgk 90 Fl+k+y++++d+++++++sw ++g +sfvv+ + efa+++Lp+yFkhsnf+SFvRQLn+YgF+kv e+ weF+++ F+kg+ ONIVA08G19780.1 27 FLTKTYQLVDDPATDHVVSWGdDDGgesaSSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGE 111 9*****************9544478889************************************999.........******** PP XXXXXXXXXXXXX CS HSF_DNA-bind 91 kellekikrkkse 103 k+ll++i+r+ks+ ONIVA08G19780.1 112 KQLLCEIHRRKSA 124 ********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEWEEESEAA RQKAAAAASA SVVPAPFLTK TYQLVDDPAT DHVVSWGDDD GGESASSFVV 60 WRPPEFARDI LPNYFKHSNF SSFVRQLNTY GFRKVVPERW EFANEFFRKG EKQLLCEIHR 120 RKSAAATWPP FPPPPPPFFA PRHFAAGAFF RHGDGMLHGR LGALVTTTER RHWFESAALP 180 VAPSSRLLSQ LGPVIAPARR AAATPEEEAL MQDNHRLLRG NAALVQELAH MRKLYSDIIY 240 FVQNHVRPVA PSPAAAAALH GLGVLRPPPA GGKAPASEVR GASGRSATSS SSFTVAEDQP 300 TLLALRLPRT TEKIINEVSG GNGGGRTKLF GVHLSSADEQ TSSGASRKRS PPQEQPPTSP 360 APKRTLVVEH SELRLSIVSP P

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEWEEESEAA RQKAAAAASA SVVPAPFLTK TYQLVDDPAT DHVVSWGDDD GGESASSFVV  60
WRPPEFARDI LPNYFKHSNF SSFVRQLNTY GFRKVVPERW EFANEFFRKG EKQLLCEIHR  120
RKSAAATWPP FPPPPPPFFA PRHFAAGAFF RHGDGMLHGR LGALVTTTER RHWFESAALP  180
VAPSSRLLSQ LGPVIAPARR AAATPEEEAL MQDNHRLLRG NAALVQELAH MRKLYSDIIY  240
FVQNHVRPVA PSPAAAAALH GLGVLRPPPA GGKAPASEVR GASGRSATSS SSFTVAEDQP  300
TLLALRLPRT TEKIINEVSG GNGGGRTKLF GVHLSSADEQ TSSGASRKRS PPQEQPPTSP  360
APKRTLVVEH SELRLSIVSP P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	4e-75	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G19780.1