PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G19420.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GeBP

Protein Properties

Length: 454aa MW: 48661.5 Da PI: 10.5125

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G19420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	100.1	2e-31	188	287	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifels 92 ++ r+w+ +De+++L++li+++ak+g+ +s+d+ ++++++++++s+k+s++ql++K+rrLK+K++ ++ +ksg++p++ +ehd++++els ONIVA08G19420.1 188 RPPRVWNPQDEVTILRALISYRAKNGAlpGSSQDTGKLHNMIRGQLSVKASTTQLSDKVRRLKHKYNLILTRvTKSGRDPDLPTEHDREVYELS 281 578**********************888999*********************************99899*************** PP DUF573 93 kkiWgs 98 kk+Wg+ ONIVA08G19420.1 282 KKVWGT 287 **95 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MAPKRPAAAS GSASEASDGE AGGAGRRRSP SRSRSPSRSA SPSRSRSKTP PHNAAVLSST 60 PASAAVDFVA ASDSDAGADA DARLASPRRS RERSPRLHSD SDNSAAATAE AAEAAAAAAF 120 DDGDDEGNAT PPPRSRRSSR VEATGVKPIS SRPMDASRRP AAASSQSQRR SKRPRSSPTQ 180 HSPEQHKRPP RVWNPQDEVT ILRALISYRA KNGALPGSSQ DTGKLHNMIR GQLSVKASTT 240 QLSDKVRRLK HKYNLILTRV TKSGRDPDLP TEHDREVYEL SKKVWGTKSG GAGAGSGGGG 300 GGGGGRVYEN AEVVQSDEEQ WSRDDSDEDM ESGWDDRDHR NRRLKAIVVA NGNGNAVTGG 360 RSVHGNGSGK GDVADKGKDM YPYLWEAVEE LSKEHPSGTA FRKAFGVLDG SRARAMEEKL 420 NRFRLSEIRQ QLRRMDLMKE TIKMVLDALE GSDL

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MAPKRPAAAS GSASEASDGE AGGAGRRRSP SRSRSPSRSA SPSRSRSKTP PHNAAVLSST  60
PASAAVDFVA ASDSDAGADA DARLASPRRS RERSPRLHSD SDNSAAATAE AAEAAAAAAF  120
DDGDDEGNAT PPPRSRRSSR VEATGVKPIS SRPMDASRRP AAASSQSQRR SKRPRSSPTQ  180
HSPEQHKRPP RVWNPQDEVT ILRALISYRA KNGALPGSSQ DTGKLHNMIR GQLSVKASTT  240
QLSDKVRRLK HKYNLILTRV TKSGRDPDLP TEHDREVYEL SKKVWGTKSG GAGAGSGGGG  300
GGGGGRVYEN AEVVQSDEEQ WSRDDSDEDM ESGWDDRDHR NRRLKAIVVA NGNGNAVTGG  360
RSVHGNGSGK GDVADKGKDM YPYLWEAVEE LSKEHPSGTA FRKAFGVLDG SRARAMEEKL  420
NRFRLSEIRQ QLRRMDLMKE TIKMVLDALE GSDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-14	GeBP family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G19420.1