PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G19230.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HB-other
Protein Properties Length: 403aa    MW: 42544 Da    PI: 7.1433
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G19230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.71.2e-102302562854
                      HHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  28 eereeLAkklgLterqVkvWFqNrRak 54 
                      +++  LAk+l+L  rqV vWFqNrRa 
  ONIVA08G19230.1 230 KQKVALAKQLNLRPRQVEVWFQNRRAS 256
                      68889********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MELGLSLGDA VTVADGGRPE LVLGLGVGVG AGVRRGEEEE RGRREDVVGA ARWAAMAAAS  60
PEPSVRLSLV SSLGLHWPSE TGRSEAAARG FDVNRAPSVA AGAPGMEDDE EGPGAAPALS  120
SSPNDSGGSF PLDLSGHGLR GHAEAAAQGG GGGGERSSSR ASDDDEGASA RKKLRLSKEQ  180
SAFLEESFKE HSTLNPLLLF FEYARTRECL FLLARSWPLT LMLLTGGEQK QKVALAKQLN  240
LRPRQVEVWF QNRRASAAPL TELTLFFSGA DVRRTKLKQT EVDCEYLKRC CETLTEENRR  300
LHKELAELRA LKTARPFYMH LPATTLSMCP SCERVASNPA TASTSAPAAA TSPAAAPTAA  360
ARTAVASPEP HRPSSFAALF AAPLGFPLTA AQPRPPPPAS NCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.12e-58HD-ZIP family protein