PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G17120.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 385aa MW: 43306.7 Da PI: 8.2696

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G17120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pGfrFhPtdeelv++yLk+k+++k++++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s ONIVA08G17120.1 16 LLPGFRFHPTDEELVSFYLKRKIQQKPISI-ELIRQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSVRPNRVTAAGFWKATGTDRPIYS 108 579*************************.89***********9888999*********************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfykgra +g ktdW+mhe+rl ONIVA08G17120.1 109 TeGTKCIGLKKSLVFYKGRAARGIKTDWMMHEFRL 143 956667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEERNDVNMD KSDEILLPGF RFHPTDEELV SFYLKRKIQQ KPISIELIRQ LDIYKFDPWD 60 LPKLASTGEK EWYFYCPRDR KYRNSVRPNR VTAAGFWKAT GTDRPIYSTE GTKCIGLKKS 120 LVFYKGRAAR GIKTDWMMHE FRLPTLTDPS LPKKPIDKNI PLNDSWTICR IFKKTSSMAQ 180 RALCQTWGAQ LPGTIDPDIF STLQSVQASQ FALESSSCSL QAAATAAHQI TSKYALQGNN 240 NNQQQQQQHK PSNPLDGSSC KVINFNCSQS AEVQNSQIIL PFEAHTSQKT ATPLLFDTQF 300 GQPDQISRFV VDSSVNANGG GISNKSQDPS ARKPGSGFSM NSDWDGVARI NFPFDLGADS 360 SEDWRSSIPW ESFLSPTTVH AEMPN

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEERNDVNMD KSDEILLPGF RFHPTDEELV SFYLKRKIQQ KPISIELIRQ LDIYKFDPWD  60
LPKLASTGEK EWYFYCPRDR KYRNSVRPNR VTAAGFWKAT GTDRPIYSTE GTKCIGLKKS  120
LVFYKGRAAR GIKTDWMMHE FRLPTLTDPS LPKKPIDKNI PLNDSWTICR IFKKTSSMAQ  180
RALCQTWGAQ LPGTIDPDIF STLQSVQASQ FALESSSCSL QAAATAAHQI TSKYALQGNN  240
NNQQQQQQHK PSNPLDGSSC KVINFNCSQS AEVQNSQIIL PFEAHTSQKT ATPLLFDTQF  300
GQPDQISRFV VDSSVNANGG GISNKSQDPS ARKPGSGFSM NSDWDGVARI NFPFDLGADS  360
SEDWRSSIPW ESFLSPTTVH AEMPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-100	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G17120.1