PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G17040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 369aa MW: 38540.9 Da PI: 8.0537 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 6.8e-16 | 83 | 128 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia ++ gR++k+c++rw++ ONIVA08G17040.1 83 RGHWRPAEDAKLRELVALYGPQNWNLIADKLD-GRSGKSCRLRWFNQ 128 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 136 | 178 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ ONIVA08G17040.1 136 RPFSDEEEERLMAAHRFYGNK-WAMIARLFP-GRTDNAVKNHWHV 178 68*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MPCTSAAWML HVGGAAAEQA SSSSSSKGGG RVVTAGTTTM DTGGYNNGGG GGGGGGNGRG 60 VGDHQESSSS GGGGGQSSRL AARGHWRPAE DAKLRELVAL YGPQNWNLIA DKLDGRSGKS 120 CRLRWFNQLD PRISKRPFSD EEEERLMAAH RFYGNKWAMI ARLFPGRTDN AVKNHWHVIM 180 ARKYREQSTA YRRRKLNQAV QRKLDATTAS DVVVAHHHPY AAAHDPYAFT FRHYCFPFPA 240 ASPAAADEPP FTCLFPGTAA TAGRGGVGGM TWPDAMAAGE VIDDGAGGGR YVVAEPPPPF 300 LVPAAPHGWL GGHEMMVMVN DGGDVAAGVA SSYDGMIGRD QGGGGSHFEA AAAAAAAPAF 360 IDFLGVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 2e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G17040.1 |