PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G16700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 192aa MW: 21880.8 Da PI: 8.4594 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.7 | 2.6e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+n + rqvtfskRr g++KKA ELS+LCdaev +++fsstg+ly+++s ONIVA08G16700.1 9 KRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTGRLYDFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 71 | 3.8e-24 | 79 | 156 | 11 | 88 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 + +a+s +e+a L+++++nLq+ +R+llG++L+ L++++Lq+Le++Le slk+iR +K++++++qi+el +k +++ ONIVA08G16700.1 79 TMNASSEAKEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVYKTK 156 556788999**************************************************************9987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGRGKIEIKR IDNATSRQVT FSKRRSGLFK KARELSILCD AEVGLLVFSS TGRLYDFASS 60 SMKSIIERYN ETKEDPHLTM NASSEAKEAA SLRQQLHNLQ EYHRQLLGQQ LSGLDVEDLQ 120 NLESKLEMSL KNIRLRKDNV MMDQIQELSR KVYKTKSNGH PTGSTIQHSF LITDNEIGPN 180 LELSLPENVE KE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-67 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G16700.1 |