PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G13920.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 336aa    MW: 35471.5 Da    PI: 6.8299
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G13920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY863.3e-27130190259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      dDg++WrKYGqK++ g+++pr+YYrCt++   gC+++k+v+r+++d ++++++Y+geH+++
  ONIVA08G13920.1 130 DDGHSWRKYGQKDILGAKHPRGYYRCTHRntqGCTATKQVQRTDDDASLFDVVYHGEHTCR 190
                      8***************************98889**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEGIVDGSGA QLVVAELVRV QGLLRQLEAH LSAPCSVELC RGLVAQIVAL TDRSIGIATR  60
SFSSASGGGA HFADTAPPMP ALTSCTPSPL SDGSDHQPFR TTNAKKRKTT ARWTSQVRVS  120
AAGGAEGPAD DGHSWRKYGQ KDILGAKHPR GYYRCTHRNT QGCTATKQVQ RTDDDASLFD  180
VVYHGEHTCR PGAASAAAAK RPHAQTLLQS LSASLTVNTD TNTPLTPENR APAPPLQQQQ  240
QQQSVSASPV ASDSYGLGGA GYGDWRCCDG DLQEVVSALA TVTSAPDHAA MDAADFMSYC  300
FDFDPAVYGG IIKLFNTIKP LALTDEQRTQ GCSSPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-26WRKY family protein