PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G10560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 203aa MW: 21749.8 Da PI: 10.8608 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.8 | 8.4e-05 | 145 | 167 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg+sFs+ L H +H ONIVA08G10560.1 145 FKCSVCGRSFSSYQALGGHKTSH 167 89**********99998888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MIRENRGPTC QRGHVSTLSL FPLLSLPPLS LSLFSASRPV AGAKAARVRR RRQVANGETE 60 ALHAAVLKEE EQQHEVEEAA VVTSSSATSG EEGGHLPQGW AKRKRSRRQR SEEENLALCL 120 LMLALGGHHR VQAPPPLSAP VGAEFKCSVC GRSFSSYQAL GGHKTSHRFK LPTPPASPVL 180 APASSEVQSP LAFSPRNSAA ARI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67450.1 | 7e-10 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G10560.1 |