PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G05790.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 288aa    MW: 31666 Da    PI: 8.5858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G05790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.18.6e-5061531129
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                      +ppGfrFhP+d+elv +yL +k+++                 +i +vd++k+ePwdLp ++  + kewyfFs rd+kyatg+r+nrat+sgyWk
  ONIVA08G05790.1   6 MPPGFRFHPRDDELVLDYLLHKLAAGGrgggvY---GggggvAIVDVDLNKCEPWDLPDAACVGGKEWYFFSLRDRKYATGHRTNRATRSGYWK 96 
                      79********************99888555541...1455546***************7666789***************************** PP

              NAM  85 atgkdkevlsk......kgel........vglkktLvfykgrapkgektdWvmheyrle 129
                      atgkd++++++      +           vg++ktLvfy+grapkg+kt+Wvmhe+rle
  ONIVA08G05790.1  97 ATGKDRSITRRssissgE--PsssaaaaaVGMRKTLVFYRGRAPKGRKTEWVMHEFRLE 153
                      **********86666550..155566666***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVEARMPPGF RFHPRDDELV LDYLLHKLAA GGRGGGVYGG GGGVAIVDVD LNKCEPWDLP  60
DAACVGGKEW YFFSLRDRKY ATGHRTNRAT RSGYWKATGK DRSITRRSSI SSGEPSSSAA  120
AAAVGMRKTL VFYRGRAPKG RKTEWVMHEF RLEPQPLHLK EDWVLCRVFY KTRQTIPSPS  180
SEEAVTLPNE LDLPATPSLP PLIDAYIAFD SAPTTTPSMV GSYEQVSCFS GLPALPMKGS  240
ISFGDLLAMD TSAEKKAIRV LHNSNTAKLE LSPDWGQESG LSQMWNPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.28e-76NAC family protein