PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G05020.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 739aa    MW: 79464.5 Da    PI: 5.1622
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G05020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox35.32e-11107147141
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-H CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLte 41 
                      +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+ 
  ONIVA08G05020.1 107 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEP 147
                      688999*********************************86 PP
2START208.13.5e-652865061206
                      HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
            START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                      ela +a++elv++a+++ep+W++ss      ++++e+ + f+++ +      ++ea+r  +vv+m++ +lve+l+d++ q+ + +     +a+t
  ONIVA08G05020.1 286 ELAVAAMDELVQMAQLDEPLWSSSSepaaALLDEEEYARMFPRGLGpkqygLKSEASRHGAVVIMTHSNLVEILMDVN-QFATVFSsivsRAST 378
                      57899********************99999999********99888999*****************************.88888888888**** PP

                      EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
            START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                      +ev+s+g      galq+m++e+q++splvp R+++fvRy++  ++g+w++vdvS+ds ++ p    v +++++pSg+li++++ng+skvtwve
  ONIVA08G05020.1 379 HEVLSTGvagnynGALQVMSMEFQVPSPLVPtRESYFVRYCKNNSDGTWAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNGYSKVTWVE 468
                      *************************************************************99....79999********************** PP

                      -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                      hv+++++++h+++++lv+sgla+gak+wv tl+rqce+
  ONIVA08G05020.1 469 HVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCER 506
                      ************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    
MTPARRMPPV IGRNGVAYES PSAQLPLTQA DMLDSHHLQQ ALQQQYFDQI PVTTTAAADS  60
GDNMLHGRAD AGGLVDEFES KSCSENVDGA GDGLSGDDQD PNQRPRKKRY HRHTQHQIQE  120
MEAFFKECPH PDDKQRKELS RELGLEPLQN QHERHENAQL RAENDKLRAE NMRYKEALSS  180
ASCPNCGGPA ALGEMSFDEH HLRVENARLR DEIDRISGIA AKHVGKPPIV SFPVLSSPLA  240
VAAARSPLDL AGAYGVVTPG LDMFGGGGDL LRGVHPLDAD KPMIVELAVA AMDELVQMAQ  300
LDEPLWSSSS EPAAALLDEE EYARMFPRGL GPKQYGLKSE ASRHGAVVIM THSNLVEILM  360
DVNQFATVFS SIVSRASTHE VLSTGVAGNY NGALQVMSME FQVPSPLVPT RESYFVRYCK  420
NNSDGTWAVV DVSLDSLRPS PVQKCRRRPS GCLIQEMPNG YSKVTWVEHV EVDDSSVHNI  480
YKPLVNSGLA FGAKRWVGTL DRQCERLASA MASNIPNGDL GVITSVEGRK SMLKLAERMV  540
ASFCGGVTAS VAHQWTTLSG SGAEDVRVMT RKSVDDPGRP PGIVLNAATS FWLPVPPAAV  600
FDFLRDETSR SESANSNQSN MLILQESCTD ASGSYVVYAP VDIVAMNVVL NGGDPDYVAL  660
LPSGFAILPD GPSGNAQAAV GENGSGSGGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL  720
IACTVERIKA AVCRDSNPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein