PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G04340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 19447.5 Da PI: 5.5007 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.5e-17 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr+++ +gr++AeIr p++ + r++lg+f+taeeAa a++ + ++ g ONIVA08G04340.1 36 EYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLSAISISG 85 588******.**********865...5*******************99988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MADAAEQHHR QEETAAATTT PQQMMMRRRR ARASSEYLGV RRRPWGRYAA EIRNPYTKER 60 HWLGTFDTAE EAAVAYDLSA ISISGAAAAR TNFLYPDMHH HHPSPPQHAL SPAVPPPPPP 120 PPPSPLYDDD YLSPAAAEEE VEAGDDESLT IATILQSFQY QQSVPPASSG SMFYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G04340.1 |