PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G03630.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 355aa MW: 36915.5 Da PI: 7.5023

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G03630.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.6	2.4e-32	164	217	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ ONIVA08G03630.1 164 PRMRWTSTLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRT 217 9****************************************************7 PP
2	Myb_DNA-binding	47	6.1e-15	165	216	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ ONIVA08G03630.1 165 RMRWTSTLHARFVHAVELLGGHdraTPKSVLELMDvKDLTLAHVKSHLQMYR 216 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MELFPSQPDL SLQIGLPTGA AAAAHGHGLN ARFFAAAAGA GGHNPAMASS PPSSLQLPLP 60 MPLPLPLPMA PAGAGAGAGG LQFYPDAAAA MLRPIRGVPL YHHHQQQHAA AAPFVGAAPL 120 PHHPSSGGAC YCEPCHVAGA WRRGGCGGGG ARGVLPAKRA PRAPRMRWTS TLHARFVHAV 180 ELLGGHDRAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKN TERPAASSDQ ADGFENGSAG 240 EICDENSLDL HGGCRPEAMS AAATAAAAAR HGRLAACNDH GSSTGAHGAL WNSSSREDWS 300 GFHESNTGTM QTLKDMQSKS LEILSDMNSC VSETTSSTSE LNLEFTLGRP QNRPN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MELFPSQPDL SLQIGLPTGA AAAAHGHGLN ARFFAAAAGA GGHNPAMASS PPSSLQLPLP  60
MPLPLPLPMA PAGAGAGAGG LQFYPDAAAA MLRPIRGVPL YHHHQQQHAA AAPFVGAAPL  120
PHHPSSGGAC YCEPCHVAGA WRRGGCGGGG ARGVLPAKRA PRAPRMRWTS TLHARFVHAV  180
ELLGGHDRAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKN TERPAASSDQ ADGFENGSAG  240
EICDENSLDL HGGCRPEAMS AAATAAAAAR HGRLAACNDH GSSTGAHGAL WNSSSREDWS  300
GFHESNTGTM QTLKDMQSKS LEILSDMNSC VSETTSSTSE LNLEFTLGRP QNRPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-38	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G03630.1