PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G02450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 790aa MW: 84630 Da PI: 6.3929 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.4e-21 | 118 | 173 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k ONIVA08G02450.1 118 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 173 688999***********************************************999 PP | |||||||
2 | START | 200.9 | 5.4e-63 | 294 | 520 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 ela +a++elv++a+++ep+W e + ++e+ ++f+++ + ++ea+r+++vv+m+++ lve l+d++ qW+ + +a+tle ONIVA08G02450.1 294 ELAVAAMEELVRMAQLGEPLWAPALggEALGEEEYARTFPRGLGpkspeLRSEASRETAVVIMNHVSLVEMLMDVG-QWTALFSsivsRAATLE 386 57899********************99999*********998889*******************************.99999999999****** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EE.SSEEEEEEEECTCEEEEEE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRael.lpSgiliepksnghskvtw 166 v+s+g galqlm+ae+q++splvp R+ f+Ry++q+++g+w++vdvS+d + ++ +R+++ +pSg+li++++ng+skvtw ONIVA08G02450.1 387 VLSTGvagnhnGALQLMSAEFQMPSPLVPtRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGggcQPAAARGHRrRPSGCLIQEMPNGYSKVTW 480 ************************************************************9999********8537****************** PP EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 vehv+ +++++h+l++++v+sg+a+ga++wvatl+rqce+ ONIVA08G02450.1 481 VEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 520 **************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 790 aa Download sequence |
MSPAMIGRPN GGGGGGGVAY ASSSSALSLG QSLLDGHHHQ LPSLLQQHHN GHHLLDQHQQ 60 HQHQLPPQAT TTSESDGRAP RDELEMSKSG GSDNLESGGG GGGGGSGDDQ DPNQRPRKKR 120 YHRHTQHQIQ ELEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKTQHERHE 180 NNALRAENEK LRAENMRYKE ALANASCPNC GGPAAIGEMS FDEHHLRLEN ARLRDEIDRI 240 SAIAAKYVGK PAAAVSAAYP PLPPSNRSPL DHMGIPGAGA DVFGADFDKP LVIELAVAAM 300 EELVRMAQLG EPLWAPALGG EALGEEEYAR TFPRGLGPKS PELRSEASRE TAVVIMNHVS 360 LVEMLMDVGQ WTALFSSIVS RAATLEVLST GVAGNHNGAL QLMSAEFQMP SPLVPTRETQ 420 FLRYCKQHPD GTWAVVDVSL DGLRAGAGGG CQPAAARGHR RRPSGCLIQE MPNGYSKVTW 480 VEHVEADDQM VHNLYKPVVN SGMAFGARRW VATLERQCER LASAMASNVA SSGDAGVITT 540 SEGRRSMLKL AERMVASFCG GVTASTTHQW TTLSGSGAED VRVMTRKSVD DPGRPPGIIL 600 NAATSFWLPV PPSRVFDFLR DDSTRSEWDI LSNGGVVQEM AHIANGRDHG NAVSLLRVNN 660 ANSNQSNMLI LQESCTDASG SYVIYAPVDV VAMNVVLNGG DPDYVALLPS GFAILPDGPD 720 GGGGSLLTVA FQILVDSVPT AKLSLGSVAT VNSLIACTVE RIKAAITGDN GVAPPCPRGS 780 REGSRANSEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G02450.1 |