PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G27260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 406aa    MW: 43943.2 Da    PI: 6.5183
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G27260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-08329357129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r++W++  ++ l+++v+++G+g+Wk I  
  ONIVA07G27260.1 329 RKKWSEKQEKTLLEGVEKYGKGNWKDIKM 357
                      789***********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MTPADAFLIL DFLAGNRLIP HSVFTTLLAS LPSVSPHTSP RLRAGLALRA LDSALSISES  60
SEMDAPTLLR KARAVLADPD LAPFFPQHLA APASADDAPA AAVAHLNRLL DVEWASLPPS  120
SLEIAAERIV GSQALHSWAN ADHAQRSKLR LLVGESTALE ILDTLQRPDA STNHPGTLPQ  180
VDNAPETNGA SHCAQQNDGA KSGLVKQNAE ADRPQQDSTR HQQDSVQGAS NSQLKESSVT  240
MESIRGTGPD ITGFMEEATP RVAGQFAPDN IKNHQVTGSK RSLMERNPTA STYEWDGSDS  300
EGKRPAAKRR LPIFERTAKP SPTAAHKTRK KWSEKQEKTL LEGVEKYGKG NWKDIKMAYP  360
DVFEDRSTDR GAISDRGAMS VGTSCSERLF SIFYLHDGLT EGFMPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.11e-05MYB_related family protein