PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G25390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 318aa MW: 33540.8 Da PI: 7.0289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.4 | 7.5e-18 | 58 | 106 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g ONIVA07G25390.1 58 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 106 56******.**********965...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MNTRGSGSSS SSSSSQASLM AFSEPPKPAS QPSPPSSPMS ERPPSGRSRR RAQEPGRFLG 60 VRRRPWGRYA AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGAQAR TNFVYTHAAY 120 NYPPFLAPFH APQYAAAAAA PSSVQYGGGV GAAPHIGSYG HHHHHHHHHG HGAASGASSV 180 GECSTMPVMV PVDPHRSSMS SSLLDMDRNG HDFLFSGADD NSGYLSSVVP ESCLRPRGGG 240 AAADHQDMRR YSDADAYGMM GLREDVDDLA QMVAGFWGGG DAADQLGACG FPASGGAADM 300 VASSQGSDSY SPFSFLSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 1e-37 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G25390.1 |