PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G25200.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CO-like

Protein Properties

Length: 380aa MW: 40312.8 Da PI: 4.7642

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G25200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.2	2.2e-05	21	54	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 +r+C+ ++ ++ +C+ ++ lC C + H ONIVA07G25200.1 21 ARCCDFCGGLPAVVYCRADSARLCLPCDRHVHAA 54 689**************************99965 PP
2	CCT	62.9	1e-21	339	379	3	43
CCT 3 aallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 ++RYkeKrk+R+F+K+irYesRKa+A+ R R+KGrF+k+ ONIVA07G25200.1 339 TVISRYKEKRKNRRFDKQIRYESRKARADGRLRIKGRFAKS 379 5689***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MARDDDPAKK LAVDGGVAAA ARCCDFCGGL PAVVYCRADS ARLCLPCDRH VHAANTVSTR 60 HARAPLCSAC RAAPAAAFHR GDGFLCSSCD FDERLRRGSI GGGGDELPLD DRAAVEGYTG 120 CPSIGELAAI LGVVGGDSDK PADDGWWSAS WEEEAPQVLS LDDIIVPTTS CHGLRPLLTP 180 PSPENQSSPD NGELDGEVLR QLGELARSEA AAQATFVAGD QLASWASPEF TSGHGDFGIE 240 AASTTVPSCE NETWIMSTDC TDPTDASKTD IAREEAPASS SAEPCLSSLV EISEICPSMS 300 YSGSGIDNGG HDPSTLAIMP TQALPKKGVY DIAYPDRGTV ISRYKEKRKN RRFDKQIRYE 360 SRKARADGRL RIKGRFAKSN

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MARDDDPAKK LAVDGGVAAA ARCCDFCGGL PAVVYCRADS ARLCLPCDRH VHAANTVSTR  60
HARAPLCSAC RAAPAAAFHR GDGFLCSSCD FDERLRRGSI GGGGDELPLD DRAAVEGYTG  120
CPSIGELAAI LGVVGGDSDK PADDGWWSAS WEEEAPQVLS LDDIIVPTTS CHGLRPLLTP  180
PSPENQSSPD NGELDGEVLR QLGELARSEA AAQATFVAGD QLASWASPEF TSGHGDFGIE  240
AASTTVPSCE NETWIMSTDC TDPTDASKTD IAREEAPASS SAEPCLSSLV EISEICPSMS  300
YSGSGIDNGG HDPSTLAIMP TQALPKKGVY DIAYPDRGTV ISRYKEKRKN RRFDKQIRYE  360
SRKARADGRL RIKGRFAKSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	3e-43	CO-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G25200.1