PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G23540.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 570aa MW: 62288.3 Da PI: 4.2387

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G23540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	113	131	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 kC Cg++Fs++s+L H+ ONIVA07G23540.1 113 KCWSCGQVFSSNSELCGHL 131 7***************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MATREYELRP EQERLGEDRE EYEDGEEEEE EEEGEEGWDD WESDGDDAGG GGGGGGLLCL 60 FCSARFDSES SLFSHCASEH RFDFYRVVKE TGMDFYGCIK LINFVRSKVA ENKCWSCGQV 120 FSSNSELCGH LHALEIPQLE GKVPWGDDVY LKPFLEDDSL LHSLSVFDDD DEDDCGMPME 180 KGGCSAGNGS LAETCESNLK SIINDGSDVI DRFERTCTIE STDGECSGSL AQEPSDKQLK 240 IARASAAARG IKSVDENYFG SYSSFGIHRE MLGDKVRTEA YRDALLGNPS LMNGATVLDV 300 GCGTGILSLF AAKAGASRVI AVDGSAKMVS VATEVAKSNG FLYDENMEMQ QKRDTQVITV 360 VHTKAEELNH KIQVPSNKFD VLVSEWMGYC LLYESMLSSV LYARDHFLKP GGAILPDTAT 420 IFGAGFGKGG TSLPFWENVY GFDMSCIGKE VTGNSARFPV VDILASEDIV TETAVLNEKP 480 VNLSTSPFST PTHWSQTIFT FEEPIAMAKE ESAVVSSASV GTDECPAVMI RSRISIVRAS 540 EHRSIDISIE TTGISSDGRK RSWPVQIFNL

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MATREYELRP EQERLGEDRE EYEDGEEEEE EEEGEEGWDD WESDGDDAGG GGGGGGLLCL  60
FCSARFDSES SLFSHCASEH RFDFYRVVKE TGMDFYGCIK LINFVRSKVA ENKCWSCGQV  120
FSSNSELCGH LHALEIPQLE GKVPWGDDVY LKPFLEDDSL LHSLSVFDDD DEDDCGMPME  180
KGGCSAGNGS LAETCESNLK SIINDGSDVI DRFERTCTIE STDGECSGSL AQEPSDKQLK  240
IARASAAARG IKSVDENYFG SYSSFGIHRE MLGDKVRTEA YRDALLGNPS LMNGATVLDV  300
GCGTGILSLF AAKAGASRVI AVDGSAKMVS VATEVAKSNG FLYDENMEMQ QKRDTQVITV  360
VHTKAEELNH KIQVPSNKFD VLVSEWMGYC LLYESMLSSV LYARDHFLKP GGAILPDTAT  420
IFGAGFGKGG TSLPFWENVY GFDMSCIGKE VTGNSARFPV VDILASEDIV TETAVLNEKP  480
VNLSTSPFST PTHWSQTIFT FEEPIAMAKE ESAVVSSASV GTDECPAVMI RSRISIVRAS  540
EHRSIDISIE TTGISSDGRK RSWPVQIFNL

Link Out ? help Back to Top
Ensembl	ONIVA07G23540.1