PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G23260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GeBP | ||||||||
Protein Properties | Length: 326aa MW: 35587.4 Da PI: 9.6959 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 107.8 | 7.9e-34 | 29 | 128 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+ ONIVA07G23260.1 29 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEI 122 79************************99877778***************************************8889***************** PP DUF573 92 skkiWg 97 ++ iW+ ONIVA07G23260.1 123 ARNIWR 128 *****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MATPAAAGGG SGSVGGVGSS SGGGERRPLF QRLWTEEDEI VILRGFAEFT AARGTAFASH 60 QYDTDPFYED MRGRLQLGFS KSQLVEKLRR LKRKYRNCVS RLRGSGSAFS FRSPHEQAIF 120 EIARNIWRPT NKHGRDGDSD DEDATQVTPA PVPVNTSPNG EVKSPTSGRQ RRRRRGGDFA 180 ATAPAAAPAT TNMVQPIQPV QVPVSVPVKM DDTLPALSQT TMPITVTMEG SEPLRLPVMP 240 PQPAVLDADK SCLTPLFKEM VRAVINIGSN PFGAQLSEPP HGLPMEGEKW RKQRILELEV 300 YLKRIELLQD QVKATLEELK SSAPGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 4e-35 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G23260.1 |