PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G22540.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 810aa MW: 89029.1 Da PI: 4.4998

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G22540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.2	5.9e-11	32	107	3	48
SS-HHHHHHHHHHHHHTTTT...............................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...............................tWktIartmgkgRtlkqcksrwqkyl 48 +W+teEd+ l ++++G++ +W+ Ia+ + +t+ qc+ rw++yl ONIVA07G22540.1 32 SWSTEEDDVLRTQIALHGTDkyeffplpisidfffldlitifytvfpfpfgSWTIIAAQFK-DKTARQCRRRWYNYL 107 6*********************************************************9.************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MATGPDLTPP AAAASAEAPS ASAAKKDRHI VSWSTEEDDV LRTQIALHGT DKYEFFPLPI 60 SIDFFFLDLI TIFYTVFPFP FGSWTIIAAQ FKDKTARQCR RRWYNYLNSE CKKGGWSREE 120 DLLLCEISEL ANMRSVTSSV RQQARHIAMT MELSMYAQKV LGNKWTEIAK VVSGRTDNAV 180 KNRFSTLCKR RAKDDELFKE NGSLCSSTSA KRALVQTGCL TSGASGSAPP IKQMRPCNSD 240 FKENMTPNMR LVGQDKSTQD SRQPLAIVYQ NNQDNMNTMD TQNLVAKTAA KQLFAGEQNC 300 VKHEGNFLNK DDPKIATLLQ RADLLCSLAT KINTENTSQS MDEAWQQLQH HLDKKDDNDM 360 SESSMSGMAS LLEDLDDLIV DPYENEEEED QDLREQTEQI DVENKQNSSQ TSMEVTSQMV 420 PDNKMEDCPN DKSTEDNNME PCPGEDIPTS ENLTEAAIED SLLQCVEYSS PVHTVIQAKT 480 DAEIAASENL SEVLEHNRLQ CIQLASPAQT TTPVEANAET PASEKLSEVV KCNNPSCIEF 540 TSPAHTVPTF LPYADDMPTP KFTASANDWG GVVMDLDFVA ASPAGSRWMA ESAARRRQQR 600 RFSSPSLRAY LTPAFDAVAA GVDGVSPYSG SASSSGGMDL GLDDSLLRYR RACFSSAATT 660 DLDHRLLVYS PQSAPVYPPP PAGDVVVAGG CRYDSKRQAG GQTGAPGYQD FNDISSLFSP 720 WQPSADHPTA TARGIPNKPP ADIRSREDTV IQAARAELST PKPDEATTPS AQPASTQAEP 780 IEEDEELIIQ TLYGQSNGRR LPIFRSICPE

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MATGPDLTPP AAAASAEAPS ASAAKKDRHI VSWSTEEDDV LRTQIALHGT DKYEFFPLPI  60
SIDFFFLDLI TIFYTVFPFP FGSWTIIAAQ FKDKTARQCR RRWYNYLNSE CKKGGWSREE  120
DLLLCEISEL ANMRSVTSSV RQQARHIAMT MELSMYAQKV LGNKWTEIAK VVSGRTDNAV  180
KNRFSTLCKR RAKDDELFKE NGSLCSSTSA KRALVQTGCL TSGASGSAPP IKQMRPCNSD  240
FKENMTPNMR LVGQDKSTQD SRQPLAIVYQ NNQDNMNTMD TQNLVAKTAA KQLFAGEQNC  300
VKHEGNFLNK DDPKIATLLQ RADLLCSLAT KINTENTSQS MDEAWQQLQH HLDKKDDNDM  360
SESSMSGMAS LLEDLDDLIV DPYENEEEED QDLREQTEQI DVENKQNSSQ TSMEVTSQMV  420
PDNKMEDCPN DKSTEDNNME PCPGEDIPTS ENLTEAAIED SLLQCVEYSS PVHTVIQAKT  480
DAEIAASENL SEVLEHNRLQ CIQLASPAQT TTPVEANAET PASEKLSEVV KCNNPSCIEF  540
TSPAHTVPTF LPYADDMPTP KFTASANDWG GVVMDLDFVA ASPAGSRWMA ESAARRRQQR  600
RFSSPSLRAY LTPAFDAVAA GVDGVSPYSG SASSSGGMDL GLDDSLLRYR RACFSSAATT  660
DLDHRLLVYS PQSAPVYPPP PAGDVVVAGG CRYDSKRQAG GQTGAPGYQD FNDISSLFSP  720
WQPSADHPTA TARGIPNKPP ADIRSREDTV IQAARAELST PKPDEATTPS AQPASTQAEP  780
IEEDEELIIQ TLYGQSNGRR LPIFRSICPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	2e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G22540.1