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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | ONIVA07G21870.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family | HB-other | ||||||||
| Protein Properties | Length: 1108aa MW: 125061 Da PI: 7.0007 | ||||||||
| Description | HB-other family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 46.1 | 8.3e-15 | 21 | 73 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
t+ ++ q++ Le+++ + +yp+ e+++e A+++gLt +qV++WF+ rR ke++
ONIVA07G21870.1 21 TKKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFKERRRKERR 73
567899*********************************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1108 aa Download sequence |
MAAVRKMAAN GLAAKRENTG TKKSPLQIQM LERFYSEVQY PQSEDIAEYA TSVGLTYNQV 60 RIWFKERRRK ERRETESLGA HMEKQLSARS NGFRCSSSRS SSFSRSTMYR TVNLQPEDDR 120 YVDKGMSFTG EKHTLRSQVL FPKDYILRKV FRKDGPPLGS EFDPLPHSAP GHLRDTTDDH 180 FYQNQRVIKK RKIVEPTTQR SSLPCGDNGP VRKHGAGKGL MTVWHAMYSH SSKIQDGSNF 240 IDETGCLRSL RPLDDCGRIE DCDDGKLIQV PSSRVTDPKK HPPMECHLSV DESQSPVLQA 300 NQVTLVDDEE LELRELQAGP NPLRCSAHLS SSGRHGCPLC KDLLSRFPPS SVKMKQPFST 360 RPWGSSPEMV KKLFQVVRFI YNRFGYMDVH PFTLDELAQA FHDKVREQEF DMNFWIKSLN 420 SLTWVEILRQ VLVASGFGSK HHMLNRDFFN KEKNQMVKYG LRPRTLKGEL FALLSKKGSG 480 GLKVSELAKS PEIVDLSISS TEIEQLIYST LSSDITLFEK IAPSAYRLRV DPRIKGKEDS 540 GSDTEDSGSV DDHSDASSGA DESDGSHEMS FSEHEHRILR RKWKNGHENV NRCSEIDESY 600 SGERWLLGLM EGEYSDLSID EKLDCLVALM DVVSGADSAP RLEEPSRVVP SIPRAQPHVS 660 GGKIKKSTRN ICQSSDECFN ASGSMYGLDS SMHEQSRSLR SRDYVAYSGR NDTSTGVAHQ 720 PQVVLLGSDR RYNNYWLFLG PCRADDPGHR RVYFESSEDG HWEVIDSPQE LLSLLASLDS 780 RGTREAYLLA SMKKRQTCLF EAMKKHYENR DAVQPAMPSD TSHSETSSGD GASPKLSSGD 840 GASPTSDIDN ASVPTNPAEN MINASSAIAI EVGRRGDEKI LKWERSQTFD KWIWTSFYSC 900 LTAVKCGKKS FKESLVRCES CHDLYWRDEK HCRICHSTFE VSFDLEERYA IHVATCRDPE 960 DAYDVPNHKV LPSQLQALKA AIHAIEAHMP EAAFAGLWMK SSHKLWVKRL RRTSSLAELL 1020 QVLVDFVGAM DEDWLYKSSS SVSFCSYLDD IVIYFQTMPQ TTSAVALWVV KLDALITPYL 1080 ERADSDRALG EESVQTRTRA CGEIARNR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 67 | 74 | RRRKERRE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G12750.1 | 1e-142 | HB-other family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | ONIVA07G21870.1 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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