PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G20780.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 341aa    MW: 37104.6 Da    PI: 4.5305
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G20780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19109159155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++y+G+r+++ +g+W+AeIrdp++     r++lg+fgtaeeAa a++  +++++g
  ONIVA07G20780.1 109 TRYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFGTAEEAAMAYDVEARRIRG 159
                      68********.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MCGGSILSDL HLPVRRTVNA GDLWGDAGKG RDGGDGLKKR KGSSWDFDVD CDDDDDDFEA  60
DFEEFEDDYG DDDDVGFGHD DQESDMNGLK LAGFSTTKLG LGGSRKRKTR YRGIRQRPWG  120
KWAAEIRDPR KGVRVWLGTF GTAEEAAMAY DVEARRIRGK KAKVNFPDAA AAAPKRPRRS  180
SAKHSPQQQK ARSSSSSPAS LNASDAVSKS NNNRVSSAGS STDATAAAIA IDDGVKLELL  240
SETDPSPPMA AAAAAWLDAF ELNDLDGSRC KDNAFDHQIH KVEAAVADEF AFYDDPSYMQ  300
LGYQLDQGNS YENIDALFGG EAVNIGGLWS FDDMPMEFRA Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104109SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-33ERF family protein