PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA07G19920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 143aa MW: 15829.6 Da PI: 10.1824 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.7e-09 | 26 | 72 | 5 | 43 |
-HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksr 43 T +Ed ++ + + +G+ +W+ Ia++++ gRt++++k++ ONIVA07G19920.1 26 TDQEDRIICSLYNSMGSTyslrawtnrRWSIIASKLP-GRTDNDVKNH 72 899*************99*******************.*********9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MNRCGKSCRL RWLNYLHLGI KHSGYTDQED RIICSLYNSM GSTYSLRAWT NRRWSIIASK 60 LPGRTDNDVK NHHQPPPQQQ HHHHHHHNHR VTGGGARVTL VSPPPTPQSQ YASMQPSSAS 120 ASSSGGNACS FGAATMYSPS PST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37780.1 | 1e-25 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA07G19920.1 |