PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G19060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 472aa    MW: 50451.3 Da    PI: 5.2589
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G19060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.94.3e-90764692373
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalkl..fsevsP 89 
                      ++lL++cA+a++++d++l+q++L+ l+++a  dgd++qRl+a f+ AL +r +r  ++ +ka+++  ++  +    ++++++a++l  f +++P
  ONIVA07G19060.1  76 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVSRASR--TGACKAVTAAVADAVEsaalHVHRFTAVELasFIDLTP 167
                      79***************************************************9..44454443333322221234666666666689****** PP

             GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefn 179
                      +++f++ +aN aI+eaveg   vHi+D++ ++++Q p+L++ La R+egpp lR+T+ + + s         +ee+g +L +fA++ +++++f+
  ONIVA07G19060.1 168 WHRFGYTAANAAIVEAVEGFPVVHIVDLSTTHCMQIPTLIDMLAGRAEGPPILRLTVADVAPSApppaLDMPYEELGAKLVNFARSRNMSMDFR 261
                      *********************************************************9886666787777789********************* PP

             GRAS 180 vl.......vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.........erdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                      v+       +++ +++l++++L  + gEal+Vn+++ lh+++de++ + s          r+ +Lk ++ l P++vvvv+++ad ++++ + r+
  ONIVA07G19060.1 262 VVptspadaLTSLVDQLRVQQLVSDGGEALVVNCHMLLHTVPDETAGSVSlttaqppvsLRTMLLKSLRALDPTLVVVVDEDADFTAGDVVGRL 355
                      **887666555566677777777777****************887665555445566657899******************************* PP

             GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                        a+++ +  +d++++ l + se+r+++E+e +g++++nv+a+eg er+er+e  ++W +r+++aGF++++++e+aa ++k++l+ ++  g+ +
  ONIVA07G19060.1 356 RAAFNFLWIPYDAVDTFLLKGSEQRRWYEAE-VGWKVENVLAQEGVERVERQEDRARWGQRMRAAGFRAAAFGEEAAGEVKAMLNDHA-AGWGM 447
                      *******************************.********************************************************.88999 PP

             GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
                      + e++ lvl+Wk++++v++SaW
  ONIVA07G19060.1 448 KREDDDLVLTWKGHNVVFASAW 469
                      9********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MQFTHTAPPP PPLHPNGHGL GLGLYLDVGA TRGGGGARPW SSSSSTTTLG GSGYFPSSAA  60
ASKISLGNLN STGCMEQLLV HCANAIEAND ATLTQQILWV LNNIAPADGD SNQRLTAAFL  120
CALVSRASRT GACKAVTAAV ADAVESAALH VHRFTAVELA SFIDLTPWHR FGYTAANAAI  180
VEAVEGFPVV HIVDLSTTHC MQIPTLIDML AGRAEGPPIL RLTVADVAPS APPPALDMPY  240
EELGAKLVNF ARSRNMSMDF RVVPTSPADA LTSLVDQLRV QQLVSDGGEA LVVNCHMLLH  300
TVPDETAGSV SLTTAQPPVS LRTMLLKSLR ALDPTLVVVV DEDADFTAGD VVGRLRAAFN  360
FLWIPYDAVD TFLLKGSEQR RWYEAEVGWK VENVLAQEGV ERVERQEDRA RWGQRMRAAG  420
FRAAAFGEEA AGEVKAMLND HAAGWGMKRE DDDLVLTWKG HNVVFASAWA PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-151GRAS family protein