PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G18570.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 544aa    MW: 60092.1 Da    PI: 6.4282
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G18570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS437.11.3e-1331745431373
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l+elL++cA+av++++  +++ ++ +l++++s +g+p++Rl ay++e+L arla+s+ ++ykal+++e +   ss+ l+++++++e++P++kf+
  ONIVA07G18570.1 174 LKELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPK---SSDLLSYMHFLYEACPYFKFG 264
                      5799*****************************************************************9...9******************** PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                      ++ aN aI eav+ge+r+HiiDf isqG+QW++LlqaLa+Rp+gpp++RiTg++++ s   +   le +g+rL+++A+ ++vpfef++l a + 
  ONIVA07G18570.1 265 YMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAyaRGGGLELVGRRLSHIASLCKVPFEFHPL-AISG 357
                      *******************************************************888899999************************6.7789 PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      +++e  +L v pgEalaVn+ l+lh+++desvs++++rd++L++vkslsPkv+++ve e+++n+++F +rf+e+l+yy+a+f+s++ +lpr+++
  ONIVA07G18570.1 358 SKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDR 451
                      ********************************************************************************************** PP

             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      eri++E+++l+reivn++aceg+er er e ++kW++rl++aGF+p pls+ +++++++ll+ ++ d y++ e++g+l+lgWk+rpLv+ SaW
  ONIVA07G18570.1 452 ERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYS-DNYKLAERDGALYLGWKSRPLVVSSAW 543
                      *****************************************************************.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MADTPTSRMI HPFSNIPSQN PKQFQYSDNP QHPCHPYRAP SDTHVVPHHY GLKSHSPDAG  60
YESQATPNKY TLDSSEGAGC MRHDSPSSQS FTTRSGSPLS QEDSHSDSTD GSPVGASCVT  120
EDPNDLKQKL KDLEAVMLGP DSEIVNSLEN SVANQLSLEP EKWVRMMGIP RGNLKELLIA  180
CARAVEEKNS FAIDMMIPEL RKIVSVSGEP LERLGAYMVE GLVARLASSG ISIYKALKCK  240
EPKSSDLLSY MHFLYEACPY FKFGYMSANG AIAEAVKGED RIHIIDFHIS QGAQWISLLQ  300
ALAARPGGPP TVRITGIDDS VSAYARGGGL ELVGRRLSHI ASLCKVPFEF HPLAISGSKV  360
EAAHLGVIPG EALAVNFTLE LHHIPDESVS TANHRDRLLR MVKSLSPKVL TLVEMESNTN  420
TAPFPQRFAE TLDYYTAIFE SIDLTLPRDD RERINMEQHC LAREIVNLIA CEGEERAERY  480
EPFGKWKARL TMAGFRPSPL SSLVNATIRT LLQSYSDNYK LAERDGALYL GWKSRPLVVS  540
SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein