PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G18460.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 629aa MW: 67156.5 Da PI: 6.0178

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G18460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1e-05	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H ONIVA07G18460.1 59 FVCEVCGKGFQRDQNLQLHRRGH 81 89*******************88 PP
2	zf-C2H2	15.6	4.6e-05	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk++ + +Lk H +t+ ONIVA07G18460.1 137 WTCQRCGKRYAVQADLKAHTKTC 159 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MPPNPTGTEG EPGPAVEPAP AGAGAAPVVK KKRNLPGTPD PDAEVIALSP GTLLATNRFV 60 CEVCGKGFQR DQNLQLHRRG HNLPWRLRQR GPGAAPPRRR VYVCPEPGCV HHNPTRALGD 120 LTGIKKHFCR KHGEKRWTCQ RCGKRYAVQA DLKAHTKTCG TREYRCDCGT LFTRRDSFVT 180 HRAFCGALVE ETGRVLAVPA PPSPRPPDLE AEENVDKDKE EEVKEKEKEK ELEENEDSPV 240 AEVDEPQPSQ AVAEVPQQCA PSPPPPILQE HPQPVVAVVP NVDEQEVVAK PAVIAKIEVE 300 DERDEEVCFQ EADRYKDAEL EDSNLLDNDT PMLPCFLPSP SEAIGTDGSS TSCGTGSSVT 360 NAIAPATTTS TFAGLFASVT TSSTPQSRSL RDLIGVDPTF LCLAIGAPSS LFPQTNASDP 420 CSFAPPPAPH MSATALLQKA AEVGASQSSS SFLKEFGLAA STSSSPPSKL SQGRFTTGNT 480 PTTSHPHPHP HPHPHPPQGR FMDNVPQPPP PAKLPHRMFT DNSVQQWHHR SNQQMEMEPG 540 PMLPGGLGLG LTYDSGNSGL PDLMMGPSAL YGPKPATLDF LGLGIGGTMG GSTANGGLPA 600 LMVGGELDMG SAQAPWEEAK RKTNGRTIL

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MPPNPTGTEG EPGPAVEPAP AGAGAAPVVK KKRNLPGTPD PDAEVIALSP GTLLATNRFV  60
CEVCGKGFQR DQNLQLHRRG HNLPWRLRQR GPGAAPPRRR VYVCPEPGCV HHNPTRALGD  120
LTGIKKHFCR KHGEKRWTCQ RCGKRYAVQA DLKAHTKTCG TREYRCDCGT LFTRRDSFVT  180
HRAFCGALVE ETGRVLAVPA PPSPRPPDLE AEENVDKDKE EEVKEKEKEK ELEENEDSPV  240
AEVDEPQPSQ AVAEVPQQCA PSPPPPILQE HPQPVVAVVP NVDEQEVVAK PAVIAKIEVE  300
DERDEEVCFQ EADRYKDAEL EDSNLLDNDT PMLPCFLPSP SEAIGTDGSS TSCGTGSSVT  360
NAIAPATTTS TFAGLFASVT TSSTPQSRSL RDLIGVDPTF LCLAIGAPSS LFPQTNASDP  420
CSFAPPPAPH MSATALLQKA AEVGASQSSS SFLKEFGLAA STSSSPPSKL SQGRFTTGNT  480
PTTSHPHPHP HPHPHPPQGR FMDNVPQPPP PAKLPHRMFT DNSVQQWHHR SNQQMEMEPG  540
PMLPGGLGLG LTYDSGNSGL PDLMMGPSAL YGPKPATLDF LGLGIGGTMG GSTANGGLPA  600
LMVGGELDMG SAQAPWEEAK RKTNGRTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	4e-93	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G18460.1