PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G17340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 425aa MW: 45094.3 Da PI: 7.0636 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.7 | 2.7e-54 | 29 | 157 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++ ONIVA07G17340.1 29 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-TIIAEVDLYKFDPWELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMA 121 79****************************.89***************99999***************************************** PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++e+vg+kk Lvfy+g+ pkg+kt+W+mheyrl ONIVA07G17340.1 122 SgsTREKVGVKKALVFYRGKPPKGVKTNWIMHEYRL 157 9777788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MESPDSSSGS APPRVLRRQQ QQPGSAPELP PGFRFHPTDE ELVVHYLKKK AASVPLPVTI 60 IAEVDLYKFD PWELPEKANF GEQEWYFFSP RDRKYPNGAR PNRAATSGYW KATGTDKPIM 120 ASGSTREKVG VKKALVFYRG KPPKGVKTNW IMHEYRLTDT SSSAAAVATT RQPPPPITGG 180 SRGAVSLRLD DWVLCRIYKK TNKAGAGQRS MECEDSVEDA VAAYAPSSQQ HATAAAGMAG 240 SDGAGGVAAA HGGDYSSLLH HDSHEDTFLV NGLLTAEDAA GLSTGASSLS QLAAAARAAA 300 TPCDATKQLL APSPTPFNWF EAFLPRAKEF PSGLSRSSRD IGDMSLSSTV DRSLSEAGAV 360 AIDTGDAANG ANTMPAFINP LGVQGATYQQ HQAIMGASLP SESAAAAAAC NFQHPFQLSR 420 VNWDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-89 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G17340.1 |