PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G17160.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 788aa MW: 87709.2 Da PI: 8.197

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G17160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.4	6.2e-19	286	385	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e+ ONIVA07G17160.1 286 FEKMLSASDAGRIGRLVLPKKCAEAYfpAISQAEGLPLKVQDATGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEG 377 89************************777788889***********99899999999.*******************987.777 PP ..EEEEE- CS B3 91 elvvkvfr 98 +lv+++++ ONIVA07G17160.1 378 KLVMGFRK 385 77777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MCARKSHAAM APSPIWSSSM HMAQNVADRK DNFVKSWRPP AGQFSSQWRQ NNMWSMSTMQ 60 SDLQQRLAFE FDRPSGSEKL LPGRTFIHAH EKKFDDMHDR STTPAGMNQI MRERYANGHT 120 QHTTLDPTYA YTLYHREGTN PNLHDHSHHA GENDHLTARK GVTSDPCSSV STTFKLDSHH 180 PSILKDDPSA VPAGLSSNFS SANGPKDHIR IGPTQQQQQM ASSSLQKQFY SHSVIDNDFQ 240 AQLRNGRPRM DAKARSQLLP RYWPRITDQE LQHLSGDSNS VITPLFEKML SASDAGRIGR 300 LVLPKKCAEA YFPAISQAEG LPLKVQDATG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM 360 QLQAGDTVTF SRIDPEGKLV MGFRKATNLS AEQDQPTKPA NGVLPPPEAN NKVVVPDSSP 420 NAAVPRPIKV NTESKSSSPV EQATACKIDK GALPQKEGPG TSSSSPLPVK RKATSVGPKI 480 KRFHMDSEES MELKITWEEA QELLRPPPKA PSIVVVDGHE FEEYEEPPIL GRRTYFVTDQ 540 SGENHQWAQC EDCSKWRKLP VDALLPSKWT CSDNKWDSER SSCDSAQEIN MEELGEMIPI 600 KPGAAKKTKG KVDTDNIDVS DGLDTLANLA ILGEGESLPS QPTTRHPRHR PGCSCIVCIQ 660 PPSGKGPKHK QTCTCNVCMT VRRRFRTLMM RREKRQQSEK DSGVPRKREP GQSSEPVPQS 720 GSGAHPTSTS SPHQRADTNG EGPEDMSIDN KRTSSPVKNQ IDLNSQPERE DEQSPKSDAT 780 RLLRDNPT

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MCARKSHAAM APSPIWSSSM HMAQNVADRK DNFVKSWRPP AGQFSSQWRQ NNMWSMSTMQ  60
SDLQQRLAFE FDRPSGSEKL LPGRTFIHAH EKKFDDMHDR STTPAGMNQI MRERYANGHT  120
QHTTLDPTYA YTLYHREGTN PNLHDHSHHA GENDHLTARK GVTSDPCSSV STTFKLDSHH  180
PSILKDDPSA VPAGLSSNFS SANGPKDHIR IGPTQQQQQM ASSSLQKQFY SHSVIDNDFQ  240
AQLRNGRPRM DAKARSQLLP RYWPRITDQE LQHLSGDSNS VITPLFEKML SASDAGRIGR  300
LVLPKKCAEA YFPAISQAEG LPLKVQDATG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM  360
QLQAGDTVTF SRIDPEGKLV MGFRKATNLS AEQDQPTKPA NGVLPPPEAN NKVVVPDSSP  420
NAAVPRPIKV NTESKSSSPV EQATACKIDK GALPQKEGPG TSSSSPLPVK RKATSVGPKI  480
KRFHMDSEES MELKITWEEA QELLRPPPKA PSIVVVDGHE FEEYEEPPIL GRRTYFVTDQ  540
SGENHQWAQC EDCSKWRKLP VDALLPSKWT CSDNKWDSER SSCDSAQEIN MEELGEMIPI  600
KPGAAKKTKG KVDTDNIDVS DGLDTLANLA ILGEGESLPS QPTTRHPRHR PGCSCIVCIQ  660
PPSGKGPKHK QTCTCNVCMT VRRRFRTLMM RREKRQQSEK DSGVPRKREP GQSSEPVPQS  720
GSGAHPTSTS SPHQRADTNG EGPEDMSIDN KRTSSPVKNQ IDLNSQPERE DEQSPKSDAT  780
RLLRDNPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-145	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G17160.1