PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G16350.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 228aa    MW: 24977.9 Da    PI: 4.6598
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G16350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.3e-0666105555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      + e+ErrRR r+N  ++ Lr ++ k            ++L  A+e+Ik+Lq
  ONIVA07G16350.1  66 NLEAERRRRGRLNGNIFALRAVMSKE-----------ATLSDAIEHIKNLQ 105
                      5689*****************99886...........6***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MPRRARARGS GGGGGEEVKV EDDFVDSVLN FGGGGGGEED GDDGEEEQQQ QQAAAAAMGK  60
EFKSKNLEAE RRRRGRLNGN IFALRAVMSK EATLSDAIEH IKNLQNEVLE LQRQLGDSPG  120
EAWEKQGSAS CSESFVPTEN AHYQGQVELI SLGSCKYNLK IFWTKRAGLF TKVLEALCSY  180
KVQVLSLNTI SFYGYAESFF TIEVKGEQDV VMVELRSLLS SIVEVPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.12e-16bHLH family protein